DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-5 and Rhbdf2

DIOPT Version :10

Sequence 1:NP_995679.1 Gene:rho-5 / 2768944 FlyBaseID:FBgn0041723 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_766160.2 Gene:Rhbdf2 / 217344 MGIID:2442473 Length:827 Species:Mus musculus


Alignment Length:918 Identity:274/918 - (29%)
Similarity:424/918 - (46%) Gaps:189/918 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 SSMVSVQAKRLEG----GGNMAVPPGSNQHQLYRSQMASNPRLQHIHHQTQQHQSLQVLPQPQNH 496
            |::.||...||:.    ..::.:||..:|....:..|....|....:.::   .|||   :|:..
Mouse     9 SNLPSVSGSRLQSRKPPNLSITIPPPESQAPGEQDSMLPERRKNPAYLKS---VSLQ---EPRGR 67

  Fly   497 -HLSCKKRIG--------MYMRRTTSQFFGVEPSTEAADCALWQGR----HRRLAIRC---FGMF 545
             ....:||.|        ..:|::|:|:|||...        |:|:    |||....|   :|..
Mouse    68 WQEGAEKRPGFRRQASLSQSIRKSTAQWFGVSGD--------WEGKRQNWHRRSLHHCSVHYGRL 124

  Fly   546 ----DTELEYHMQQ----------------------AIGGGNEDAGQSNGTNGNYAPDRPDILPV 584
                ..|||...|:                      |.|.......:.:..:..:.|..|.:|.:
Mouse   125 KASCQRELELPSQEVPSFQGTESPKPCKMPKIVDPLARGRAFRHPDEVDRPHAAHPPLTPGVLSL 189

  Fly   585 QDAIGMDMTMSGDSRRQKCYTNRDFLAGEFVERKASVGYM-FVAMVSYLVHMFNKRRPIQMHRVR 648
            .....:....|...||                ::.||.:| |.|..:.|    ..|..:.....|
Mouse   190 TSFTSVRSGYSHLPRR----------------KRISVAHMSFQAAAALL----KGRSVLDATGQR 234

  Fly   649 CPWQWSRSFA-PIHVQSHSNQQTDADGCLTDGLEAIIDDEVFFDSPCEITTSAVND--ESSDIGR 710
            |. ...|||| |      |..:.||    .||.:..  |..||..  |..:|..:|  ||..:..
Mouse   235 CR-HVKRSFAYP------SFLEEDA----VDGADTF--DSSFFSK--EEMSSMPDDVFESPPLSA 284

  Fly   711 QAAK--PRPCADQSGVGVSVYMAERQQNGWRTSALNSGGNATSDINLTGDQSSHQPGAAHIPLCS 773
            ...:  |...:..|..||.:.:.|           .|||.|..            ||.       
Mouse   285 SYFRGVPHSASPVSPDGVHIPLKE-----------YSGGRALG------------PGT------- 319

  Fly   774 SVSSQMQPAMRSSHSTTSTCNRGNRITAQLLD------------GVLEN-SRRPPLRCIKYFSVN 825
                                .||.||.:::..            ||:.| ..|...|.|......
Mouse   320 --------------------QRGKRIASKVKHFAFDRKKRHYGLGVVGNWLNRSYRRSISSTVQR 364

  Fly   826 DLDDRTDHRPFFTYWINTVQVVVLILSIICYGIAPIGIGSEQKTGQVLVTSLSLQTVQHVEQRNL 890
            .|:....|||:||||:..|.:::.:|.|..|||||:|......|..||......::|::::|.|.
Mouse   365 QLESFDSHRPYFTYWLTFVHIIITLLVICTYGIAPVGFAQHVTTQLVLKNRGVYESVKYIQQENF 429

  Fly   891 WIGPRNIDLVHMGAKFAACMRRDIKITEVVTKTRRHERETACCIRNDDSGCVQSSQAECSIRGLY 955
            ||||.:|||:|:||||:.|:|:|.:|.::|.:.|..||.:.||::||.|||:|:.:.:||     
Mouse   430 WIGPSSIDLIHLGAKFSPCIRKDQQIEQLVRRERDIERTSGCCVQNDRSGCIQTLKKDCS----- 489

  Fly   956 PTKSISTWKKWSPSESGPGGRI-------SGSVCGLDPKFCDAPASIAPYEWPDDITKWPICRKT 1013
              ::::|:.||. :::||..:.       |..||..||:.|:.|||...:.|||||||||||   
Mouse   490 --ETLATFVKWQ-NDTGPSDKSDLSQKQPSAVVCHQDPRTCEEPASSGAHIWPDDITKWPIC--- 548

  Fly  1014 NSFTQRYRYKDHTS-EHMVCEVIGHPCCTGLYGECRITTREYCDFIKGYFHEEASLCSQISCLNN 1077
               |::.: .:||. .|:.|::.|.|||.|..|.|.|||||||:|:.|||||:|:||||:.||:.
Mouse   549 ---TEQAQ-SNHTGLLHIDCKIKGRPCCIGTKGSCEITTREYCEFMHGYFHEDATLCSQVHCLDK 609

  Fly  1078 VCGMFPFISVETPDQLYRLLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFA 1142
            |||:.||::.|.|||.||:..||.:||||:|..::::||...|.|||:|.|..|.:|::|:||..
Mouse   610 VCGLLPFLNPEVPDQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGIT 674

  Fly  1143 GNLTSAILVPHRPEVGPSASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGIGTLPY 1207
            |||.|||.:|:|.||||:.|..|::|.|...| :..|:.|.:|..|.|.|..:...|...|.||:
Mouse   675 GNLASAIFLPYRAEVGPAGSQFGLLACLFVEL-FQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 738

  Fly  1208 QLNFLGLLAGVICGCLLTMSLVPFTTFSKYGRKKKINLIWTCVLFHVVVYTAMIVTFYIHPSEFH 1272
             ::.:..:.|.:.|.||..:.:|:.||....:.:|..||...:|....::.::::..||:|..:.
Mouse   739 -IDNIAHIFGFLSGMLLAFAFLPYITFGTSDKYRKRALILVSLLVFAGLFASLVLWLYIYPINWP 802

  Fly  1273 SISFVDMF 1280
            .|.::..|
Mouse   803 WIEYLTCF 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-5NP_995679.1 Rhomboid 1090..1225 CDD:426384 55/134 (41%)
Rhbdf2NP_766160.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..86 17/82 (21%)
Rhomboid_SP 98..281 CDD:463639 47/225 (21%)
Rhomboid 619..762 CDD:426384 58/144 (40%)
MFS 720..>810 CDD:475125 21/90 (23%)

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