DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33299 and Vajk4

DIOPT Version :10

Sequence 1:NP_995671.2 Gene:CG33299 / 2768912 FlyBaseID:FBgn0053299 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_611205.1 Gene:Vajk4 / 36950 FlyBaseID:FBgn0050101 Length:328 Species:Drosophila melanogaster


Alignment Length:245 Identity:68/245 - (27%)
Similarity:91/245 - (37%) Gaps:112/245 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GGGGSGSLGSGGG----------GDGHF---HH--------------------HTPTTYSE---- 81
            ||........|.|          ||.|.   ||                    |.|.|..:    
  Fly    19 GGAVEDKKAEGDGKTVEKRGLHLGDYHHYQPHHEHIKTVTIEKKIPVPYTVTKHVPYTVEKKIPY 83

  Fly    82 -----------ISKHVPVHVIE--KVPLPIPHPVAV--QVPNVIRLQIPEPYAVHVPVQQ----- 126
                       :.|.|||||.|  |||:.:|.|..|  ::|..:::.:.:||.|.|||.|     
  Fly    84 EVKVDVPQPYIVEKKVPVHVKEYVKVPVHVPKPYEVIKKIPYEVKVPVDKPYEVKVPVPQPYEVI 148

  Fly   127 -----EIHVPV---YKIVPEITE---------------KKIP----YTVEKPYPVEVEKPYPVEV 164
                 |:.|||   |:::.::..               ||:|    |.|||||.|||.|||.|||
  Fly   149 KKIPYEVKVPVPQPYEVIKKVPHEVKVEVPVPKPYEVIKKVPYEVKYEVEKPYDVEVPKPYDVEV 213

  Fly   165 IK------------QIKIPVPKPY----------------PVPFTIYKHV 186
            .|            ::|:||.|||                |.|:|:.|.|
  Fly   214 EKPYTVVVEKKVPYEVKVPVDKPYKVEVEKPYPVHVKVPVPQPYTVEKKV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33299NP_995671.2 None
Vajk4NP_611205.1 rne <137..313 CDD:236766 40/127 (31%)

Return to query results.
Submit another query.