DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33310 and gabbr2

DIOPT Version :10

Sequence 1:NP_995718.2 Gene:CG33310 / 2768910 FlyBaseID:FBgn0053310 Length:876 Species:Drosophila melanogaster
Sequence 2:NP_001137515.1 Gene:gabbr2 / 560267 ZFINID:ZDB-GENE-060503-620 Length:935 Species:Danio rerio


Alignment Length:141 Identity:30/141 - (21%)
Similarity:59/141 - (41%) Gaps:24/141 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KHVTTEPNKNG-----------NPSKDDVNTRGSLTSLSEKNDESKNPSSSASLQQAPKVAPKPK 65
            |.||...|.:.           |..|:|..|..|:||:::.|....:...|.:.:...|:....|
Zfish   738 KFVTMRTNPDAATQNRRLKFTQNQKKEDSKTSTSVTSVNQANTSRLDGLQSDNHRLRMKITELDK 802

  Fly    66 KLSISDAGKDTVTQKVKENEE--PGFSKQFEKESIGVRANRNSSATKKENEKLLVKTVPGKSLIK 128
            :|       :.||.::::..|  |...:...:::..:.:.||.: ..|:.||.|...:..|   .
Zfish   803 EL-------EEVTMQLQDTPEKTPYIKQNHYQDANNILSIRNFT-DGKDGEKSLKNHLEQK---P 856

  Fly   129 ESNDENVEPSR 139
            ::...:.:|||
Zfish   857 QAQWGSADPSR 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33310NP_995718.2 Na_K-ATPase <703..846 CDD:471796
gabbr2NP_001137515.1 PBP1_GABAb_receptor 56..455 CDD:380589
7tmC_GABA-B-R2 475..744 CDD:320421 3/5 (60%)
TM helix 1 475..500 CDD:320421
TM helix 2 512..533 CDD:320421
TM helix 3 549..573 CDD:320421
TM helix 4 592..612 CDD:320421
TM helix 5 648..674 CDD:320421
TM helix 6 683..706 CDD:320421
TM helix 7 713..738 CDD:320421 30/141 (21%)
GBR2_CC 774..812 CDD:465774 8/44 (18%)
Blue background indicates that the domain is not in the aligned region.

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