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Protein Alignment CG33310 and nkb-2

DIOPT Version :9

Sequence 1:	NP_995718.2	Gene:	CG33310 / 2768910	FlyBaseID:	FBgn0053310	Length:	876	Species:	Drosophila melanogaster
Sequence 2:	NP_501958.1	Gene:	nkb-2 / 177950	WormBaseID:	WBGene00008074	Length:	374	Species:	Caenorhabditis elegans

Alignment Length:	331	Identity:	68/331 - (20%)
Similarity:	118/331 - (35%)	Gaps:	122/331 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly   601 PSHWLYTLVFSVLYILF----VIIFSMAWFDFIKDDASRKVPMIKMAQPFISFTPIGPRTNPKAV 661
            |..::::.:|  |::|:    ::..::.||:|.:.|  |:.|:......|:...|        .|
Worm   100 PYGYIFSFIF--LFVLWGLATMLAIALVWFNFSRLD--RQYPIYFGDGSFLGGAP--------KV 152

  Fly   662 SFDP----------RNS------------------TEVMEKYAGIMA---------------LLE 683
            ||||          :|:                  .:|::||:|.:.               ..|
Worm   153 SFDPNPRQFLEDGTKNAMSWNIYEFSTYVNYLIRYKQVLKKYSGGIGKQKVKKEEMCKNQTMTRE 217

  Fly   684 KYGDYGHNPRFGTCTAN-----EKFGYPSGEPCVFLKVNRIIGF-------KTEPYINSDEL--- 733
            ....:.....||.||.:     ..|||..|:||:.||:|:|:|:       |.:....|.:|
Worm   218 NACKFDRLTDFGECTLSLDNLERGFGYSKGQPCIMLKLNKIVGWVPNLSPSKNKTKCPSGDLCCG 282

  Fly   734 --VKAKIDEVEFTALKRLLENTTTEEGHLNRTWITCRSDKDKNVLIEFHPEPAIRTEYTDIEEKI 796
              :|.|                             |.|:.|  |..|:.|:..|.|.|      .
Worm   283 QGIKFK-----------------------------CTSNAD--VKFEYFPKTGIPTCY------F 310

  Fly   797 EYIANEGKKSFFGPNDVNRIVALKIKNLKANERVHINCKMWAQNIHHRKEG-YGQVSFFVLLATN 860
            .| ||:|  .:..|..:     :|:.|:..|....|.|.....:::....| ..:..|.:|:..|
Worm   311 PY-ANQG--GYEQPYQM-----VKLTNITVNRETTIECAPEDSSLNTLASGKTNEARFHILMTKN 367

  Fly   861 ENRERV 866
            ...|.|
Worm   368 RPVETV 373

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG33310	NP_995718.2	Na_K-ATPase	<703..846	CDD:471796	35/154 (23%)
nkb-2	NP_501958.1	Na_K-ATPase	98..340	CDD:471796	61/296 (21%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-
Hieranoid	0	0.000	Not matched by this tool.