DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and din1

DIOPT Version :9

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_594904.1 Gene:din1 / 2542540 PomBaseID:SPAC19D5.06c Length:352 Species:Schizosaccharomyces pombe


Alignment Length:350 Identity:94/350 - (26%)
Similarity:156/350 - (44%) Gaps:69/350 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 AMYNTP---FPSISRPKCIGVCSINASREFVDDASCASYLAGQPWPPLPFDLNGGIEDVIRKPVE 80
            :.|:.|   .|.:|.|..|...|::..||.:.|.|..||.  .| |||..|||.|..:....|  
pombe     6 SFYDVPPAHVPPVSEPLEIACYSLSRDRELLLDDSKLSYY--YP-PPLFSDLNTGFPNRFHPP-- 65

  Fly    81 NGKRD---LEIMLTYIKQHQKELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNRSFRVKAT 142
              |.|   :.|:        |::|.     .:.::::|.|:|.||::.:|||...|.|:......
pombe    66 --KSDPDPISIV--------KDVLM-----TKGIQMNSSFLTWRGLITKIMCAPLDPRNHWETYL 115

  Fly   143 LL---NGNVYMCKEETPEQQLENANMSRAQRVMCSWGFKFEQYLT-------SAQAQGKPVTNVP 197
            ::   :|.:.|  ||....:...||..|    ||.||:|||...|       .::.|.:...|..
pombe   116 VMDPTSGIIMM--EERTRSETSYANQDR----MCYWGYKFEAISTLPEIWDACSRDQIEQRDNQD 174

  Fly   198 VNEAEEFMGVYRTNLAGILMLYGAELDCVDSKEPVDFKDCRVLD---------------SLKFVE 247
            |...|::..:.:.|:....::...|:||:..|:|...|:..|..               :|.:||
pombe   175 VVPDEQYCSIVKINIGKSKLILAGEVDCIWDKKPCSAKESDVHSDDGTIEEDASNAENPNLHYVE 239

  Fly   248 LKTS-VFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYVGLRDTKGMLQRIDEI---DVATLARN 308
            |||| .:.:..:.:|.    |...:|:||||:||..:.:|.||..|:|..:.|:   .:..:.|.
pombe   240 LKTSKKYPLENYGMRK----KLLKYWAQSFLLGIGRIIIGFRDDNGILIEMKELFTHQIPKMLRP 300

  Fly   309 --KP--WSASAMAWYLEQFLRNLKK 329
              ||  |:.:.:...||..|..:|:
pombe   301 YFKPNDWTPNRLLVVLEHALEWIKQ 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:285815 27/87 (31%)
din1NP_594904.1 RAI1 200..283 CDD:285815 26/86 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I3288
eggNOG 1 0.900 - - E1_KOG1982
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38061
Inparanoid 1 1.050 88 1.000 Inparanoid score I1772
OMA 1 1.010 - - QHG53045
OrthoFinder 1 1.000 - - FOG0004964
OrthoInspector 1 1.000 - - oto101848
orthoMCL 1 0.900 - - OOG6_104243
Panther 1 1.100 - - LDO PTHR12395
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R331
SonicParanoid 1 1.000 - - X3502
TreeFam 1 0.960 - -
1413.860

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