DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rai1 and M01G12.14

DIOPT Version :10

Sequence 1:NP_996492.1 Gene:Rai1 / 2768882 FlyBaseID:FBgn0030793 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001364602.1 Gene:M01G12.14 / 173093 WormBaseID:WBGene00010825 Length:340 Species:Caenorhabditis elegans


Alignment Length:343 Identity:69/343 - (20%)
Similarity:131/343 - (38%) Gaps:102/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 INASREFVDDASCASYLAGQPWPPLPFDLNGGIEDVIRKPVEN--GKRDLEIMLTYIKQ----HQ 97
            :|.::::::|            |.|||.    ..||..|..:|  |::.:|.:|:|:.|    ::
 Worm    28 LNENKKYLED------------PTLPFP----YVDVQLKVPDNGGGEKHMESVLSYLNQMGWPNK 76

  Fly    98 KELLRQSSSDARNLRLDSDFVTLRGILRQIMCLQYDNR--SFRVKATLLNGNVYMCKEE-----T 155
            |:               .||||.|..:..|....:.::  :.|:.....:|.:::.|..     |
 Worm    77 KK---------------PDFVTNRHTITTIATTGFSSKEQAQRLLIFRYSGVIFLLKSSEFDDLT 126

  Fly   156 PEQQLENANMSRAQRVMCSWGFKFEQYLTSAQAQGKPVTNVPVNEAEEFMGVYRTNLAGILMLYG 220
            |:              :.::..|||.:......:.....:..|.:|.....:.|.|.....:||.
 Worm   127 PD--------------ILNYAIKFEHFFKKTSDEEPVGGDGTVRKAVFKATIPRGNEHPYSVLYS 177

  Fly   221 AELDCVDSKEPVDFKDCRVLDSLKFVELKTSVFNMNPHQIRTFKSFKSANWWSQSFLVGITTLYV 285
            .|:|.:..:|           |.:.||||..|..::.::.:    |:|...:.|:|...:.||.:
 Worm   178 GEMDAIYDEE-----------SREHVELKVFVNGLDNYKWK----FRSCWMYWQAFFSNVPTLVI 227

  Fly   286 GLRDTK-----------------GMLQRIDEIDVATLARN-----------KPWSASAMAWYLEQ 322
            |.|..|                 ..|:| |.|.....|::           |.||.:|...:|..
 Worm   228 GSRTGKEYQSISKHIPGFSLYKVEKLER-DSIPSTAAAKHAQRMGDRPFPPKIWSVAAGERHLRV 291

  Fly   323 FLRNLKKLLVNINDPFAV 340
            ||:.:|:..::..|.|.:
 Worm   292 FLQLVKETAISDGDCFVL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rai1NP_996492.1 RAI1 224..296 CDD:462550 18/88 (20%)
M01G12.14NP_001364602.1 None

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