DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp212 and LOC548809

DIOPT Version :9

Sequence 1:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 -ID:- Length:334 Species:Xenopus tropicalis


Alignment Length:296 Identity:77/296 - (26%)
Similarity:127/296 - (42%) Gaps:56/296 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 VVTVPPATPPPQRFDPRSQISSVVCGREGSTTPF----IVRGNEFPRGQYPWLSAVYHKEVRALA 303
            :|:..|.........||      :||     :|.    ||.|.:...|.:||..::.:|.    :
 Frog    31 LVSASPTVSQNTTASPR------ICG-----SPLVSSRIVGGTDATNGAWPWQISLRYKG----S 80

  Fly   304 FKCRGSLISSSIVISAAHCVH--RMTEDRVVVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTRS 366
            ..|.||:||:..:::||||..  |...|..|: ||.|.| ........:.:|.|::.:|.: |..
 Frog    81 HICGGSVISNQWIMTAAHCFEYSRTPSDYQVL-LGAYQL-SVASASELLSSVARVIVNPSF-TIP 142

  Fly   367 YSDADIALITIERPVTFNDIIAPICMWTVEASRTVSTTGF-------IAGWGRDEDSSRTQYPRV 424
            ....||||:.:..||.:.:.|.|:|:       ..|.:||       :.|||....:....||:.
 Frog   143 GGPGDIALLKLTSPVAYTEYILPVCV-------PSSASGFYEGMQCWVTGWGNIGSAVTLPYPQT 200

  Fly   425 VEAEIASPTVCASTWRG------------TMVTERSLCAGNRDG-SGPCVGDSGGGLMVKQGDRW 476
            :: ::.:|.:..||...            .:|.:..:|||...| ...|.|||||.|:.:....|
 Frog   201 LQ-QVMTPLISWSTCNQMYHVQSGISSNIAIVPKDQICAGYAAGQKDSCQGDSGGPLVCQLQGVW 264

  Fly   477 LLRGIVSAGERGPAGTCQLNQYVLYCDLSKHINWIS 512
            ...||||.|:    |..|.::..:|..:....:|:|
 Frog   265 YQIGIVSWGD----GCAQASRPGVYTLVPNFKSWLS 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp212NP_996209.2 GD_N 23..122 CDD:292649
Tryp_SPc 277..514 CDD:238113 70/258 (27%)
Tryp_SPc 277..511 CDD:214473 68/255 (27%)
LOC548809NP_001016055.2 Tryp_SPc 57..294 CDD:214473 68/255 (27%)
Tryp_SPc 58..297 CDD:238113 70/258 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.