DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Sp212 and Tpsg1

DIOPT Version :9

Sequence 1:	NP_996209.2	Gene:	Sp212 / 2768666	FlyBaseID:	FBgn0053329	Length:	516	Species:	Drosophila melanogaster
Sequence 2:	NP_783183.1	Gene:	Tpsg1 / 302990	RGDID:	631355	Length:	311	Species:	Rattus norvegicus

Alignment Length:	281	Identity:	73/281 - (25%)
Similarity:	117/281 - (41%)	Gaps:	69/281 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   267 CGR-----EGSTTPFIVRGNEFPRGQYPWLSAVYHKEVRALAFKCRGSLISSSIVISAAHCVHRM 326
            ||:     .||.   ||.|:....|.:||.:::..::|..    |.|||:|...|::||||..
  Rat    18 CGQPQVSHAGSR---IVGGHAAQAGAWPWQASLRLQKVHV----CGGSLLSPEWVLTAAHCFS-- 73

  Fly   327 TEDRVVVGLGRYDLDDY----GEDGAEMRNVMRLLWHPDYNTRS----YSDA--------DIALI 375
                     |..:..||    ||        :.:...|.::|..    ||.|        ||||:
  Rat    74 ---------GSVNSSDYEVHLGE--------LTITLSPHFSTVKQIIMYSSAPGPPGSSGDIALV 121

  Fly   376 TIERPVTFNDIIAPICMWTVEASRTVSTTGFIAGWGRDEDSSRTQYP--------RVVEAEIASP 432
            .:..||..:..:.|:|:....|........::.|||..::....:.|        .||:.|..|.
  Rat   122 QLATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQ 186

  Fly   433 TVCASTWRGTMVTERSLCAGNRDGSGP---CVGDSGGGLMVKQGDRWLLRGIVSAGERGPAGTCQ 494
            ...:|  .|:::....|||.     ||   |..||||.|:.:....|...|:||.||    |..:
  Rat   187 AYSSS--NGSLIQSDMLCAW-----GPGDACQDDSGGPLVCRVAGIWQQAGVVSWGE----GCGR 240

  Fly   495 LNQYVLYCDLSKHINWISENI 515
            .::..:|..::.::|||..:|
  Rat   241 PDRPGVYARVTAYVNWIHRHI 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sp212	NP_996209.2	GD_N	23..122	CDD:292649
		Tryp_SPc	277..514	CDD:238113	68/263 (26%)
		Tryp_SPc	277..511	CDD:214473	66/260 (25%)
Tpsg1	NP_783183.1	Tryp_SPc	29..257	CDD:214473	66/264 (25%)
Tpsg1	NP_783183.1	Tryp_SPc	30..260	CDD:238113	68/263 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910