DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLRA2 and pHCl-1

DIOPT Version :10

Sequence 1:NP_002054.1 Gene:GLRA2 / 2742 HGNCID:4327 Length:452 Species:Homo sapiens
Sequence 2:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster


Alignment Length:423 Identity:124/423 - (29%)
Similarity:197/423 - (46%) Gaps:79/423 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    40 QTLSPSDFLDKLMGRTSGYDARI-------------------------RPNFKGPPVNVTCNIFI 79
            ::.|..:.||.|:.: ..||.|:                         ||:.:| .:.|..|:.:
  Fly   333 ESSSDKEILDLLLEK-KRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRG-TLTVNVNVLL 395

Human    80 NSFGSVTETTMDYRVNIFLRQQWNDSRLAY---SEYPDDSLDLDPSML---DSIWKPDLFFANEK 138
            .|..|..|:::.|.|...|.|||||.||.|   |.|  |.|    :.|   ||||.||.:|... 
  Fly   396 LSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHY--DFL----NALHHHDSIWTPDTYFIMH- 453

Human   139 GANFHD-VTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIF 202
             .:|.| :...:..|||.:||.:.|::|..|.|||...|..||.|...|:..:||..|....:.:
  Fly   454 -GDFKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKY 517

Human   203 EWLSD-GPVQVAEGL-TLPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPS 265
            .|.:| ..::.:..| ||..:::|.:...  |.::...|.::|::|:....|...||...::||.
  Fly   518 VWKNDEDTLRKSPSLTTLNAYLIKNQTTA--CDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPG 580

Human   266 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFA 330
            :::|..|:::||:..:|.||||.:|:||:|...|.|:|.|::||.||.:.|:::|..||:.|::|
  Fly   581 IILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYA 645

Human   331 ALLEYAAVNFVSRQ---HKEFLRLRRRQKRQNKEEDVTRESRFNFSGYG---------------- 376
            :|||:..||:|.|:   |....|        ..|..||:......|..|                
  Fly   646 SLLEFVCVNYVGRKRPLHNVVYR--------PGENPVTQRLPAVLSRIGVILASPLASAAATPAM 702

Human   377 --MGHCLQVKDGTAVK----ATPANPLPQPPKD 403
              ||....:..||...    |||..|....|::
  Fly   703 SMMGGATPMSSGTPAASSSVATPGTPRITDPEE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLRA2NP_002054.1 LIC 46..441 CDD:273305 123/417 (29%)
pHCl-1NP_001261898.1 LIC 339..>662 CDD:455710 107/334 (32%)
LGIC_TM <948..975 CDD:476813
TM4 helix 950..971 CDD:349850
Blue background indicates that the domain is not in the aligned region.

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