DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG31778 and Chtf18

Sequence 1:NP_001285596.1 Gene:CG31778 FlyBaseID:FBgn0051778 Length:102 Species:Drosophila melanogaster
Sequence 2:XP_006245998.1 Gene:Chtf18 RGDID:1310473 Length:969 Species:Rattus norvegicus

Alignment Length:33 Identity:11/34 (32%)
Similarity:14/34 (41%) Gaps:3/34 (9%)


  Fly    20 ILEQPFTAEAVVRDACQTAPNKSVWLCSPSTLG 52
            :||:...||.   |..:....|...||.|..||
  Rat   344 VLEEMLEAEL---DPSRRPRQKVALLCGPPGLG 373

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG31778NP_001285596.1 KU 46..83 CDD:294074 4/8 (50%)
Chtf18XP_006245998.1 AAA 346..516 CDD:99707 10/32 (31%)
DNA_pol3_delta <486..553 CDD:303078
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG1969
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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