DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and sacy-1

DIOPT Version :10

Sequence 1:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_491962.1 Gene:sacy-1 / 172413 WormBaseID:WBGene00019245 Length:630 Species:Caenorhabditis elegans


Alignment Length:543 Identity:182/543 - (33%)
Similarity:269/543 - (49%) Gaps:75/543 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 ERRGRLDREERG-GERRGRLDREERGG--------ERGERGD---------GGFARRRRNEDDIN 186
            |.:|.:|..||. .|....||:..|||        .:||:.:         .|..||:..||   
 Worm   106 ETQGVIDESERQLMEEEELLDKVTRGGGLLAVAELTKGEKYEEPIVTAWRPPGHIRRQSQED--- 167

  Fly   187 NNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSAD 251
                  .:::|||                               :.:...|..:|.||..|....
 Worm   168 ------YEIQRKR-------------------------------LGISCEGDHIPPPIGSFLEMK 195

  Fly   252 LRDIIIDNVNK-SGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELE 315
            ....:::.:.| .|...||.||...|||..||||::..|.||||||..|:||::...||...:|.
 Worm   196 FPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLP 260

  Fly   316 LGR---PQVVIVSPTRELAIQIFN------EARKFAFESYLKIGIVYGGTSFRHQNECITRGCHV 371
            ..|   |..:|:.|:||||.|||:      :|...|....::.|:..||.....|.:.:..|.|:
 Worm   261 FMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHI 325

  Fly   372 VIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFP 436
            |:||||||.|.:.:..|..|..|::|||||||||||||.::::.|.  ...:.:.|||:||||.|
 Worm   326 VVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIF--YFFKAQRQTLLFSATMP 388

  Fly   437 EEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSEQADGTIVFVETKRG 501
            .:||..|...|...:.|.:|..|.|..:|.|.:..|....|..:::|.|.:.:...::|.|.|..
 Worm   389 RKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVD 453

  Fly   502 ADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDM 566
            .|.:..:|..|.....||||.:.||.|...:..|:.....||:||.|||:|||.:.|:||||:||
 Worm   454 VDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDM 518

  Fly   567 PSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRTCGAGGDGGY 631
            |..|::||||||||||.|..|.||:|.:.:.:.::.:||.::|..:||.:|:||:.. ||.:.|.
 Worm   519 PEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKML-AGDEEGT 582

  Fly   632 ----SNQNFGGVDVRGRGNYVGD 650
                :|...|.....|.|:.:.|
 Worm   583 APAGTNAEKGCAYCSGLGHRITD 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_723899.1 SrmB 247..617 CDD:440279 146/379 (39%)
sacy-1NP_491962.1 SrmB 190..570 CDD:440279 146/381 (38%)

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