DRSC/TRiP Functional Genomics Resources

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Protein Alignment solo and Ddx4

DIOPT Version :9

Sequence 1:NP_001027274.2 Gene:solo / 26067079 FlyBaseID:FBgn0283440 Length:1031 Species:Drosophila melanogaster
Sequence 2:XP_063137794.1 Gene:Ddx4 / 310090 RGDID:1308793 Length:743 Species:Rattus norvegicus


Alignment Length:292 Identity:69/292 - (23%)
Similarity:90/292 - (30%) Gaps:140/292 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDWDDE----------PIVD----TRGARGGDWSDDEDTAKSFSGEAEGDGVGG-----SGGEGG 48
            :||:.|          |:.:    :.||.|    |..:...:.|.|.| ||..|     ..|...
  Rat    14 EDWEAEILKPHVSSYVPVFEKDKYSSGANG----DTFNRTSASSSEME-DGPSGRDHFMRSGFSS 73

  Fly    49 GYQGGNRDV-----------FGRIGGGRGGGAGGY------------------------------ 72
            |...||||:           .|..|.|:|.|..|:                              
  Rat    74 GRNLGNRDIGESSKRETTSTTGGFGRGKGFGNRGFLNNKFEEGDSSGFWKESTNDCEDTQTRSRG 138

  Fly    73 ---RGGNRDG------GGFHGGRREGERDFRGGEGGFRGG---------QGGSRGG--------- 110
               |||..||      |.|   ||.|...|||..|||..|         ||..|||         
  Rat   139 FSKRGGYPDGNDSEASGPF---RRGGRGSFRGCRGGFGLGRPNSEYDQDQGSQRGGGLFGSRKPA 200

  Fly   111 ---------------QGGSRGGQGGFRG-----------------GEGGFRGRLYENEDAK---- 139
                           |..|..|:||::|                 .|||      |:.|.:    
  Rat   201 ASDSVQCFTGSGDTFQSRSGNGRGGYKGLNEEVVTGSGKNSWKSEAEGG------ESSDIQGPKV 259

  Fly   140 -ELPPIPSSCDKDEVGA-FIDQLDLSKYTTSL 169
             .:||.|.. |:|.:.| :...::..||.|.|
  Rat   260 TYIPPPPPE-DEDSIFAHYQTGINFDKYDTIL 290

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