DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56i and Obp28a

DIOPT Version :10

Sequence 1:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster


Alignment Length:145 Identity:37/145 - (25%)
Similarity:55/145 - (37%) Gaps:34/145 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLVVVTLPTCFVQAGPIK----------DQCMAAAGITAQDVANRHETDDPG-HSVKCFFRCFL 62
            :|:.:|.|....|:|...|          :.||...|.|..|:....:..... ::.||...|.:
  Fly     7 ILVAIVLLGAALVRAFDEKEALAKLMESAESCMPEVGATDADLQEMVKKQPASTYAGKCLRACVM 71

  Fly    63 ENIGIIADNQIIPGAFDRVLGHIVTAE-----------AVERMEATCNMIKSETSHDESCEFAWQ 116
            :||||:..|    |..|...||....:           |:| :..||..|   |..|:.||.|..
  Fly    72 KNIGILDAN----GKLDTEAGHEKAKQYTGNDPAKLKIALE-IGDTCAAI---TVPDDHCEAAEA 128

  Fly   117 ISECYEGVRLSDVKK 131
            ...|:.|    :.||
  Fly   129 YGTCFRG----EAKK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:460193 28/117 (24%)
Obp28aNP_523505.1 PBP_GOBP 24..134 CDD:460193 29/117 (25%)

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