DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56i and Obp19d

DIOPT Version :10

Sequence 1:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster


Alignment Length:122 Identity:27/122 - (22%)
Similarity:47/122 - (38%) Gaps:33/122 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 AGPIKDQCMAAAGITAQDVANRHETDDP-GHSVKCFFRCFLENIGIIADNQIIPGAFDRVLGHIV 86
            |..:.::|.|..|.|.:||......|.| .|..||...|.::.:.|:.::           |.:.
  Fly    34 AAELANECKAETGATDEDVEQLMSHDLPERHEAKCLRACVMKKLQIMDES-----------GKLN 87

  Fly    87 TAEAVERME-----------------ATCNMIKSETSHDESCEFAWQISEC-YEGVR 125
            ...|:|.::                 |.|..|::...|   |:.|:...|| ||.::
  Fly    88 KEHAIELVKVMSKHDAEKEDAPAEVVAKCEAIETPEDH---CDAAFAYEECIYEQMK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:460193 24/114 (21%)
Obp19dNP_523421.2 PBP_GOBP 26..139 CDD:460193 26/118 (22%)

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