DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp56i and LOC1281982

DIOPT Version :10

Sequence 1:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster
Sequence 2:XP_061504263.1 Gene:LOC1281982 / 1281982 VectorBaseID:AGAMI1_005225 Length:159 Species:Anopheles gambiae


Alignment Length:138 Identity:28/138 - (20%)
Similarity:60/138 - (43%) Gaps:24/138 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TCCALLLVVVTLPTCFVQAGPIKDQ---------------CMAAAGIT---AQDVANRHETDDPG 51
            |...:|:|:|.|.|...|...::.|               |:.::|||   |:.:|......:|.
Mosquito    21 TMVRVLIVLVALLTFAGQPLAVRGQQELSDLPEVKGYKLHCIESSGITESSAKKLAAGESIKEPD 85

  Fly    52 HSVKCFFRCFLENIGIIADNQII-PGAFDRVLGHIVTAEAVERMEATCNMIKSETSHDESCEFAW 115
            ...|||.:||.:.:.::.:..:: ....:..|..::.|:..:.....|::.::     ..|:.|:
Mosquito    86 QPTKCFVQCFFQKLRLMDEKGVVLKDKLEVFLTKLMDADKAKDYVQQCDLRRT-----NPCDTAY 145

  Fly   116 QISECYEG 123
            .:.:||.|
Mosquito   146 AVYDCYLG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:460193 18/114 (16%)
LOC1281982XP_061504263.1 None

Return to query results.
Submit another query.