DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp51a and Obp56d

DIOPT Version :10

Sequence 1:NP_725436.1 Gene:Obp51a / 246666 FlyBaseID:FBgn0043530 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_611444.2 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:126 Identity:42/126 - (33%)
Similarity:62/126 - (49%) Gaps:19/126 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVFIGLVLLLAVTTLSSALFESE-----ANE--CAKKLGITPDYF-----ENFPHSS-RVKCFY 52
            ||..|.|.::||::.....|.:.:     ||.  ||::.|||.|..     .||..|. :||||.
  Fly     1 MKFLIVLSVILAISAAELQLSDEQKAVAHANGALCAQQEGITKDQAIALRNGNFDDSDPKVKCFA 65

  Fly    53 HCQMEKLEIIANGVVTPFDLKVLNISP---ESYDKYGVKVKPCLKLSHRDKCELGYLVFQC 110
            :|.:||:..:.||.|.| |:.:..:.|   |...| .|:.| |......|||:..|.:|:|
  Fly    66 NCFLEKIGFLINGEVQP-DVVLAKLGPLAGEDAVK-AVQAK-CDATKGADKCDTAYQLFEC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp51aNP_725436.1 PBP_GOBP 21..111 CDD:467938 35/106 (33%)
Obp56dNP_611444.2 PBP_GOBP 19..127 CDD:460193 36/108 (33%)

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