DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG30480 and abd-A

Sequence 1:NP_001260976.1 Gene:CG30480 FlyBaseID:FBgn0050480 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_732176.1 Gene:abd-A FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster

Alignment Length:204 Identity:38/205 (19%)
Similarity:60/205 (29%) Gaps:86/205 (42%)


  Fly     4 TIVEERSVNETIETIATSSGSVQETIEIVNID---GSVAPKH--------------------RHH 45
            ||....:.|....:.:.||.|...:    |::   ||::|.|                    :||
  Fly    65 TIAGSNTSNTNNSSSSPSSSSNNNS----NLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHH 125

  Fly    46 ----------------HHHHRHHHH-----------HERQENVEVVATEEVILVENAPKSRKHHH 83
                            ||..:.|||           .::|.::..:|...|       .|..|.|
  Fly   126 PQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAV-------ASHGHAH 183

  Fly    84 HKQRTSPPPPLPQTSPPFLTPTEEVGFNVVWEPQAFWNQPSPNPSTDLDLS-----QDNEVVDAV 143
            .:...:||.                    ....||..:..||:||.....|     .||....|.
  Fly   184 QQLLLTPPS--------------------AGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSAS 228

  Fly   144 ETMDTTSAS 152
            .:...::||
  Fly   229 ASASASAAS 237

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG30480NP_001260976.1 PRK10263 <499..>757 CDD:236669
abd-ANP_732176.1 Homeobox 402..454 CDD:278475
Abdominal-A 456..478 CDD:289192
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C129372107
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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