DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30480 and ftz

DIOPT Version :10

Sequence 1:NP_725409.1 Gene:CG30480 / 246640 FlyBaseID:FBgn0050480 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:275 Identity:49/275 - (17%)
Similarity:91/275 - (33%) Gaps:83/275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 SVVERLDVTEEVEPSVRPPLPLSYPPRSGFVESIVENIEVEQVTPSYQPPQQIVPQSGFVET--- 600
            |..:.:::.....|...||   :|...||       :....|.|.:|   |...||..:.|:   
  Fly    11 SYADNMNMYNMYHPHSLPP---TYYDNSG-------SNAYYQNTSNY---QGYYPQESYSESCYY 62

  Fly   601 FVEDIEIKESALPPIQNGYAP-----------QAGVVETIVEEVE----IVPDPPRQSIVTTDYM 650
            :....::....:||:|....|           .|.::..:.|...    ::.:|.::...|.||.
  Fly    63 YNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYF 127

  Fly   651 PRASLVQELVVESLEVTP------TSSPPP---EQFPFISRESLIVADDYVEVEEVTPYNTAPHS 706
                   ...||.::..|      |:||.|   :::..:...|.....||::|          :|
  Fly   128 -------YTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDV----------YS 175

  Fly   707 PIVEVERLSEAESYVEINEVAPVNTPPQRSVEVGFLPRPSLAETAVVVESVEVTPTPTPPPSPAL 771
            |..:.::|...: :.......|.:.||...:.                         |||.||..
  Fly   176 PQSQTQKLKNGD-FATPPPTTPTSLPPLEGIS-------------------------TPPQSPGE 214

  Fly   772 KLKIPPSNQIPSEVI 786
            |.....|.:|...::
  Fly   215 KSSSAVSQEINHRIV 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30480NP_725409.1 None
ftzNP_477498.1 FTZ 1..248 CDD:397787 49/275 (18%)
Homeodomain 255..311 CDD:459649
KLF1_2_4_N <321..404 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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