DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG30480 and pb

Sequence 1:NP_001260976.1 Gene:CG30480 FlyBaseID:FBgn0050480 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_476669.3 Gene:pb FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster

Alignment Length:224 Identity:35/225 (16%)
Similarity:55/225 (24%) Gaps:119/225 (53%)


  Fly    35 DGSVAPKHRHHHHHHRHHH----HHER--------------------------QENVEVVATEEV 69
            :|:....|:..||||..||    ||:.                          |:..:....:.|
  Fly   554 NGTPYLNHQQQHHHHAQHHQQQQHHQNHVADFEGPVNGPSNFNNGAYYDNMSFQQQAQAHQHQTV 618

  Fly    70 ILVENAPK-----SRKHHHH-------------------------------KQRTSPPPPLPQT- 97
            :..:..|.     :.:|.||                               .......||:|.| 
  Fly   619 VFQQQQPHQPAAINHQHMHHLGNGETYSALGLQMENCEGYNNFGAAGTGGGYYEAGQQPPIPATH 683

  Fly    98 ----------------------------------SPPFLTPTEEVGFNVVWEP----QAFWNQPS 124
                                              .||   |:...||.:...|    |||.|..|
  Fly   684 GHGHHPHHVQVPAQAHAPIHAHHNSAAIPGGVGVGPP---PSHIHGFAINGGPAVQGQAFGNNGS 745

  Fly   125 PNPSTDLDLSQDNEVVDAVETMDTTSASD 153
            ....|           .|:..::.:::||
  Fly   746 TAAGT-----------AAISGLENSNSSD 763

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG30480NP_001260976.1 PRK10263 <499..>757 CDD:236669
pbNP_476669.3 COG5576 168..274 CDD:227863
Homeobox 202..254 CDD:278475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C129372362
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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