DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30480 and lab

DIOPT Version :10

Sequence 1:NP_725409.1 Gene:CG30480 / 246640 FlyBaseID:FBgn0050480 Length:920 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:254 Identity:45/254 - (17%)
Similarity:89/254 - (35%) Gaps:43/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 PRQSIVTTDYMPRASLVQELVVESLEVTPTSSPPPEQFPFISRESLIVADDYVEVE-EVTPYNTA 703
            |:|      :.|...|.|:...:.|:      .|.:...:...||....:.|.:.: ::||..|:
  Fly    41 PQQ------HQPHLQLQQQQQHQHLQ------QPQQHLTYNGYESSSPGNYYPQQQAQLTPPPTS 93

  Fly   704 PHSPIVEVERLSEAESYVEINEVAPVNTPPQRSVEVGFLPRPSLAETAVVVESVEVTPTPTPPPS 768
            .|..:.:.::..:|:.              |:......|..||.||..:      .|.|.|..|.
  Fly    94 SHQVVQQHQQQQQAQQ--------------QQLYPHSHLFSPSAAEYGI------TTSTTTGNPG 138

  Fly   769 PALKLKIPPSNQIPSEVIVDQPVPSSTFKPP-----AKPLNNFILTDLVIDDPPFVEVVEREVVV 828
            ..|.    ||:..|::...:.....|.:...     |.|.|:..:|..........:..:::..:
  Fly   139 TPLH----PSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPITAANASATSNTQQQQQQAAI 199

  Fly   829 ESANNGQVTEVIEVTEEIIQPVTPIGTVLVGEVSEQNSDKFGKRYSLSATLADGQQQVQ 887
            .|:.||.:...::......|...|:.. ..|::.|:.:......|:....|.|....:|
  Fly   200 ISSENGMMYTNLDCMYPTAQAQAPVHG-YAGQIEEKYAAVLHASYAPGMVLEDQDPMMQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30480NP_725409.1 None
labNP_476613.1 Homeodomain 505..558 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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