DRSC/TRiP Functional Genomics Resources

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Protein Alignment Opbp and ztf-28

DIOPT Version :10

Sequence 1:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_503566.1 Gene:ztf-28 / 185364 WormBaseID:WBGene00018099 Length:272 Species:Caenorhabditis elegans


Alignment Length:242 Identity:54/242 - (22%)
Similarity:82/242 - (33%) Gaps:80/242 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 KPRDSESSRKLAQRTSLDKEKPGFPCQYCERVFTRPFEKVKHERVHTGEKPYACEVCGKTFRVSY 340
            ||.......:.|:::||.:::        |....||..:        |:  :.|..||:.|:...
 Worm     7 KPLIDRFETEFAEKSSLLRKE--------ESELKRPDLR--------GD--FLCLSCGQNFKHGA 53

  Fly   341 SLTLHLR-THTNIRPYVCTVCNKRFKSHQVYSHHLRIHSSERQFSCDACPKTFRTSVQLYAHKNT 404
            ||..|.: .|::  .|.|.:|.::....:....|:|                           |.
 Worm    54 SLNRHRKLVHSD--EYTCMLCARKLYLKETVRDHMR---------------------------NE 89

  Fly   405 H--TKPYRCAVCNRPFSSMYAVKNHMQTHKEISSKGSVGSGTPNIKSAAT------SKSQAAGKF 461
            |  .:.|.|..||..||:..|:..|.   |.|...|:.|...|..||..:      |..|.|| |
 Worm    90 HYLGQVYTCGCCNWTFSNKKALTEHA---KAIQETGAPGDANPIAKSGNSPGSLLKSPIQRAG-F 150

  Fly   462 YCNTCGAEYARLFALRLHMKSAHGLVEEQENPATSTDAAHVAETDDS 508
            ..|            ||..||.        :|:||......:..|.|
 Worm   151 KLN------------RLLNKSL--------SPSTSNSTTSSSSRDAS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OpbpNP_724479.1 COG5048 <185..433 CDD:227381 32/159 (20%)
C2H2 Zn finger 254..274 CDD:275368
C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
SFP1 <323..373 CDD:227516 12/50 (24%)
C2H2 Zn finger 329..349 CDD:275368 7/20 (35%)
C2H2 Zn finger 357..377 CDD:275368 4/19 (21%)
C2H2 Zn finger 385..405 CDD:275368 1/19 (5%)
C2H2 Zn finger 411..431 CDD:275368 7/19 (37%)
ztf-28NP_503566.1 COG5236 <14..>114 CDD:227561 29/146 (20%)
C2H2 Zn finger 42..63 CDD:275368 7/20 (35%)
C2H2 Zn finger 69..90 CDD:275368 5/47 (11%)
C2H2 Zn finger 98..114 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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