DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cGlr2 and cgasa

DIOPT Version :10

Sequence 1:NP_001400984.1 Gene:cGlr2 / 246606 FlyBaseID:FBgn0050424 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_685111.1 Gene:cgasa / 557043 ZFINID:ZDB-GENE-090313-23 Length:592 Species:Danio rerio


Alignment Length:387 Identity:79/387 - (20%)
Similarity:145/387 - (37%) Gaps:94/387 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VEKKLYECKKKYVD---IPKDEGQRYGKHYEALTSKIFEILRKENPE-LDIIIAEFSLEGSVGDM 71
            |:..|.:..|..:|   |.|.|..:..:....:|.|:...|:::... .||   |....||..:.
Zfish   218 VKDALGDVLKATLDKLTIKKSERSKASRCVNEITEKVIAHLKQDTTWCADI---ERLRTGSYYEN 279

  Fly    72 LKIAKPNEFDLVFKLKFPY-------------YKSIAVTRDPKIPGNVLLDMTRVLELLKDDPRE 123
            |||.:|:|||::  |..|.             :.|||:.|.|                 ...|.:
Zfish   280 LKICEPDEFDVM--LTVPVERVDIQNFDEAGAFYSIALKRHP-----------------NKHPLD 325

  Fly   124 DFQRIRELIQGRLVDAQNFFVVDRLRSWLQSLFSQALNRISYRVELVAGVVSHLKYRTCGPAHTI 188
            .|     |.:.:.:.|..  ::...|..::....:|.: :.|::::      ..|...| ||.|:
Zfish   326 KF-----LNEDKTIQASE--MLSEFRDGVKKAVEKATD-LPYKIKI------QRKKPKC-PAVTL 375

  Fly   189 YV-YGDYEYSVDYVPAICLAAEQNVLPTKQLECFK------RANTSYWEAIPKPLKPLTE----- 241
            .| .|....|||:|  :.|...:...|....:.|:      |...|..:..|..|.|..|     
Zfish   376 EVTEGRKNISVDFV--LGLKVHRASWPELTKDGFRVEHWLGRKVKSTMKRQPFYLVPKYEGIGNA 438

  Fly   242 -----TSMISFRSSFYAVEKILLQD---------------VHENCRNAIRFM---KKFRDVKTN- 282
                 .:..|:|.||..:||.:|:.               ..:.|...::::   .|..:.|:| 
Zfish   439 EHDGVVARDSWRISFSHIEKEILKSHGHTKTCCEGREQKCCRKECLKLLKYLLQQLKNDESKSNK 503

  Fly   283 LGNCKSYYIKTLFLWKIIQE-PESYW-LNPLSFILADMFDDLAENLRRGVITFFWDPELNMI 342
            :.:..||:.||..|...... .:..| .:.|:.....:.:|..::|:...:..|:.|..|::
Zfish   504 MSSFCSYHAKTTLLQACASRGTDIEWAYSELANCFQQLLEDFVKHLKNHQLPNFFIPSHNLL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cGlr2NP_001400984.1 Mab-21 69..261 CDD:460873 48/221 (22%)
Mab-21_C 265..359 CDD:466416 16/84 (19%)
cgasaXP_685111.1 PTZ00108 <17..198 CDD:240271
Mab-21 276..463 CDD:460873 48/222 (22%)
Mab-21_C 479..582 CDD:466416 16/87 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.