DRSC/TRiP Functional Genomics Resources

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Protein Alignment cGlr2 and itprip

DIOPT Version :10

Sequence 1:NP_001400984.1 Gene:cGlr2 / 246606 FlyBaseID:FBgn0050424 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001017872.1 Gene:itprip / 550570 ZFINID:ZDB-GENE-050417-422 Length:539 Species:Danio rerio


Alignment Length:418 Identity:87/418 - (20%)
Similarity:153/418 - (36%) Gaps:118/418 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LENFVEKKLYECKKKYVDIPKDEGQRYGKHYEALTSKIFEILRKE-NPELDIIIAEFSLEGSVGD 70
            |.||       ||.::.....:.| |..:..|.....:.|.||.. :.:.|:.:.:|:..||:.:
Zfish   129 LNNF-------CKTRFFPYTNESG-RVREFIEGFADDLLEALRSICDLKADLEVEDFAGIGSMFE 185

  Fly    71 MLKIAKPNEFDLV--FKLKFPYYKSIAVTRDP--KIP------GNVLL----------------- 108
            ..:::||...||:  |....|......:..||  :||      |.:.|                 
Zfish   186 SWRVSKPPTCDLIVPFSPPQPLRFQFELWCDPSTEIPLDLQGCGRIQLIKPGGNGTDCLCGSIDL 250

  Fly   109 --DMTRVL------ELLKDDPREDFQRIRELIQGRLVDAQNFFVVDRLRSWLQSLFSQALNRISY 165
              ||..:|      |:|:||      .:.||:..|   ...:....::..|.|...|:|..:||:
Zfish   251 GDDMLCLLHNRNECEVLEDD------ALPELLCAR---DTTYLSKGQIMRWFQISVSKAWGKISH 306

  Fly   166 RVELVAGVVSHLKYRTCGPAHTIYVYGDYEYSVDYVPAICL------AAEQNVLPTKQLECFKRA 224
            :.:.      .|.:|                ::|:..|:.:      ....|:.|..|.|     
Zfish   307 KYDF------ELAFR----------------NLDFPGALKIKFPSGKTVVLNLTPAVQFE----- 344

  Fly   225 NTSYWEAIPKPLKPLTETSMIS---FRSSFYAVEKILLQDV---------HENCRNAIRFMKKFR 277
            ||..:.....|    ::||..|   ::.|....||.||:.:         |.:|...:.|:.|.:
Zfish   345 NTDAYLISHFP----SDTSNSSDTHWQLSLSVYEKNLLKHLAKSLPTNSCHIHCLQIVAFLHKKQ 405

  Fly   278 DVKTNLGNCKSYYIKTLFLWKIIQEPESYWLNP--LSFILADMFDDLAENLRRGVITFFWDPELN 340
            ...|......:|:|||..|..::.:..:.| .|  |...|.|:...|.::|.          |..
Zfish   406 TTLTGRSAFCNYHIKTALLHLLLSKRPAMW-QPQNLDSRLRDLLSFLQQSLE----------EKK 459

  Fly   341 MIDALTRDQVWEMYLCVQRIPRDLRGAE 368
            :..||..:....:.:.|   |:.:|.||
Zfish   460 LYHALVGNPRIPVEILV---PKIIRTAE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cGlr2NP_001400984.1 Mab-21 69..261 CDD:460873 47/235 (20%)
Mab-21_C 265..359 CDD:466416 20/95 (21%)
itpripNP_001017872.1 DUF5595 <23..63 CDD:465636
Mab-21_C 390..>462 CDD:466416 18/82 (22%)
Blue background indicates that the domain is not in the aligned region.

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