DRSC/TRiP Functional Genomics Resources

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Protein Alignment cGlr2 and mab-21

DIOPT Version :10

Sequence 1:NP_001400984.1 Gene:cGlr2 / 246606 FlyBaseID:FBgn0050424 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_651971.2 Gene:mab-21 / 44127 FlyBaseID:FBgn0029003 Length:365 Species:Drosophila melanogaster


Alignment Length:342 Identity:66/342 - (19%)
Similarity:123/342 - (35%) Gaps:104/342 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KKLYECKKKYVDIPKDEGQRYGKHYEALTSKIFEILRK---ENPELDIIIAEFS--LEGSVGDML 72
            |.:|:..|...|..:....:..|..:.:...:.::|::   :.|.....:.:::  .||     |
  Fly    13 KMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFISSLNDYNGRFEG-----L 72

  Fly    73 KIAKPNEFDLVFKLKFPYYKSIAVTR---DPKIPGNVLLDMTRVLELLKDDPREDFQRIRELIQG 134
            ::..|.||:::.     |...:.|..   |..:||..:|.::            |.::....:..
  Fly    73 EVISPTEFEIII-----YLNQMGVLNFVDDGTLPGCAVLKLS------------DGRKRSMSLWV 120

  Fly   135 RLVDAQNFFVVDRLRSWLQSLFSQALNRISYR--VELVAGVVS-HLKYRTCGPAHTIYVYGDYEY 196
            ..:.|..:....::||..|:|.:||.::.:||  |:::|.... .|:.|.             ..
  Fly   121 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDIVKMIADTTEVKLRIRE-------------RI 172

  Fly   197 SVDYVPAICLAAEQNVLPTKQLECFKRA-----NTSYWEAIPKPLKPLTETSMI----------- 245
            .|...||                 ||.|     :.|:|   |.|..|....:::           
  Fly   173 IVQITPA-----------------FKCAGLWPRSASHW---PLPGIPWPHPNIVAEVKTEGFDML 217

  Fly   246 -----------------SFRSSFYAVEKILLQDVHENCRNAIRFMKKFRDVKTNL-GN-CKSYYI 291
                             ::..||...|..|||....  |..:..:|..||...:| || ..||::
  Fly   218 SKECIALQGKNSAMEGDAWVLSFTDAENRLLQGASR--RRCLSILKTLRDRHLDLPGNPVTSYHL 280

  Fly   292 KTLFLWKIIQEP-ESYW 307
            |||.|::..:.| |..|
  Fly   281 KTLLLYECEKHPREMEW 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cGlr2NP_001400984.1 Mab-21 69..261 CDD:460873 40/230 (17%)
Mab-21_C 265..359 CDD:466416 16/46 (35%)
mab-21NP_651971.2 Mab-21 68..250 CDD:460873 42/236 (18%)
Mab-21_C 253..350 CDD:466416 16/47 (34%)

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