DRSC/TRiP Functional Genomics Resources

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Protein Alignment cGlr2 and Itprip

DIOPT Version :10

Sequence 1:NP_001400984.1 Gene:cGlr2 / 246606 FlyBaseID:FBgn0050424 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001388686.1 Gene:Itprip / 100912218 RGDID:6488464 Length:557 Species:Rattus norvegicus


Alignment Length:251 Identity:49/251 - (19%)
Similarity:94/251 - (37%) Gaps:57/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 RLRSWLQSLFSQALNRIS--YRVELVAGVVS-----HLKYRTCGPAHTIYVYGDYEYSVDYVPAI 204
            ::..|.|:..::|.:|||  |..:|..|.:.     .:|:|                |..::|.:
  Rat   304 QVMKWFQTALTKAWHRISHKYEFDLAFGELDTPGSLKIKFR----------------SGKFMPFV 352

  Fly   205 CLAAEQNVLPTKQLECFKRANTSYWEAIPK-PLK--PLTETS-MISF----RSSFYAVEKILLQD 261
            .         |..::| ..::..:...:|| |.:  |.:.|. ::||    |.......|.|.:.
  Rat   353 L---------TPVIQC-NDSDLYFTSQLPKEPCRGAPASNTDWLLSFAVYERQFLRMTAKALPEG 407

  Fly   262 V-HENCRNAIRFMKKFRDVKTNLGNCKSYYIKTLFLWKIIQEPESYW-LNPLSFILADMFDDLAE 324
            . |.:|.....|:...:...|.......|::||..|..::....:.| .:.|...|.::|..|..
  Rat   408 ACHLSCLQIASFLLSKQSRLTGPSGLSDYHLKTALLHLLLSRQAADWKTSQLDVRLQELFCFLER 472

  Fly   325 NLRRGVITFFWDPELNMIDALTRDQVWEMYLCVQRIPRDLRGAEISRNKWSFFVLR 380
            :|....:..|:.....:.:|:             .:|..:|.|| ..|.:..|||:
  Rat   473 SLLEKKLHHFFVGNHKVPEAM-------------GLPEVVRRAE-PLNLFRSFVLQ 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cGlr2NP_001400984.1 Mab-21 69..261 CDD:460873 25/128 (20%)
Mab-21_C 265..359 CDD:466416 15/94 (16%)
ItpripNP_001388686.1 Mab-21_C 413..>487 CDD:466416 14/73 (19%)

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