DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and brdt

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_002662470.2 Gene:brdt / 333996 ZFINID:ZDB-GENE-030131-5928 Length:1093 Species:Danio rerio


Alignment Length:325 Identity:95/325 - (29%)
Similarity:141/325 - (43%) Gaps:72/325 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSA 75
            |..:..|..|:|.:||..:...||.||:|:|.:.|||.|||||:.:|||:||::.::....|..|
Zfish   270 SERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTIKKKMEAREYTDA 334

  Fly    76 ADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV-----QLYICSSGSKV---RAEE 132
            ..||.|:||:|.|.|.|..|.|....||::||.:||..:|::     .....||.::|   ||..
Zfish   335 LQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKIPDEPKNANPVSSHNRVKKERARS 399

  Fly   133 ESSSDESD--SSSPE-----DEVNGSEVSPSIMGAPPSCTPTTE----CTPTPDWTP-------- 178
            .|||:.||  |||||     :|.:..|.:..:...........|    .|.||...|        
Zfish   400 PSSSESSDSESSSPENSSDTEEEDEEERAHRLASLEEQLKAVREQLQLLTQTPLLKPKKKEKSKK 464

  Fly   179 ------------------PATL-------ETSEQQE-------------PFTTEEDLDLHAKIQQ 205
                              ||.:       ::|.::|             |.:.||...|...|.:
Zfish   465 KKKKERESSKRKGEEMKKPAKILKRSSSSKSSGRKESRACDSEEEMNTLPMSYEEKRQLSLDINK 529

  Fly   206 LDGEVLLHVIHFIQRMEG--AEYCNKELEFDICKLKVHTKRGIRDYLASKGFTGKRVART---KP 265
            |.|:.|..|::.|:..|.  .:...:|:|.|...||..|.|.:..|:.  |...|:...|   ||
Zfish   530 LPGDKLGKVVNIIKAREPLLRDTDPEEIEIDFETLKPSTLRALECYVV--GCLRKKTKETNKNKP 592

  Fly   266  265
            Zfish   593  592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 43/100 (43%)
BET 190..252 CDD:435704 19/63 (30%)
brdtXP_002662470.2 Bromo_Brdt_I_like 29..135 CDD:99929
Bromo_Brdt_II_like 273..373 CDD:99930 43/99 (43%)
BET 514..576 CDD:435704 18/61 (30%)
PHA03247 <743..904 CDD:223021
BRD4_CDT 1051..1093 CDD:465349
Blue background indicates that the domain is not in the aligned region.

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