DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and Brdt

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_063129088.1 Gene:Brdt / 305123 RGDID:1306678 Length:952 Species:Rattus norvegicus


Alignment Length:324 Identity:82/324 - (25%)
Similarity:134/324 - (41%) Gaps:66/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ETERSSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTG 70
            :|.:.:.::..|..|:|.:.:..:...||.||.|:|...||||:|::||:.||||.|::.:::..
  Rat   264 KTVKVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQ 328

  Fly    71 CYLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV---------QLYICSSGS 126
            .|..|.:||.|:||:|.|.|.|..|||....||:.||.:||..::::         ..::.::.:
  Rat   329 EYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKIPDEPVESMRACHLTTNSA 393

  Fly   127 KVRAEE---ESSSDESDSSSPEDE----------------------------------------- 147
            |..:.|   |:||.:..|...|||                                         
  Rat   394 KALSRESSSEASSGDCSSEDSEDERVQRLAKLQEQLNAVHQQLQVLSQVPLRKLKKKNEKSKRAP 458

  Fly   148 ----VNGSEVSPSIMGAPPSCTPTTECTPTPDWTPPATLETSEQQEPFTTEEDLDLHAKIQQLDG 208
                ||..| :|.............:........|...||..:..:|...:|...|...|.:|.|
  Rat   459 KRKKVNRDE-NPKKKAKQMKQKEKAKSNQPKKKKPLLKLEEEDNAKPMNYDEKRQLSLDINKLPG 522

  Fly   209 EVLLHVIHFIQRMEGAEYCNK--ELEFDICKLKVHTKRGIRDY----LASKGFT--GKRVARTK 264
            :.|..::|.||..|.:...:.  |:|.|...||..|.|.:..|    |..:...  .|:|.|:|
  Rat   523 DKLGRIVHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKYVLACLRKRSLKPHAKKVVRSK 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 41/100 (41%)
BET 190..252 CDD:435704 20/67 (30%)
BrdtXP_063129088.1 None

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