DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30392 and Plekha8

DIOPT Version :9

Sequence 1:NP_001286672.1 Gene:CG30392 / 246587 FlyBaseID:FBgn0050392 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001102705.1 Gene:Plekha8 / 500132 RGDID:1563940 Length:520 Species:Rattus norvegicus


Alignment Length:210 Identity:56/210 - (26%)
Similarity:94/210 - (44%) Gaps:34/210 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ETSLLDEDDVQLDAYLAAYEEIMKFFQLMG-SVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTF 93
            :..||::..:..:|:||:...::.....:| :||:.|..|:...|.   .:..|....:|.|.|.
  Rat   322 DIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIK---KVNQKYITNKEEFTTL 383

  Fly    94 RTMLDYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQKTVDVCKEAYDDTLGK 158
            :.::.:|.||.:...:.  |.:..||.|.|||.|:..||..::....|.:|  ....||..||.:
  Rat   384 QKIVLHEVEADVARVRN--SATEALLWLKRGLKFLKGFLTEVKNGEKDIQT--ALNNAYGKTLRQ 444

  Fly   159 HHSFLIRKGARLAMYAMPT-----------RGDLLKKVCSDVEAAKEN-----LPSMLKHMRTNY 207
            ||.:::|....||:.|.|:           .||..|:..|   |..:.     ||:|.|.:..  
  Rat   445 HHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFS---AGMQRDLSLYLPAMEKQLAI-- 504

  Fly   208 DRTEDLYTLYDLHSL 222
                 |.|||::|.|
  Rat   505 -----LDTLYEIHGL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30392NP_001286672.1 GLTP 42..186 CDD:285880 42/155 (27%)
Plekha8NP_001102705.1 PH_FAPP1_FAPP2 1..100 CDD:269951
PH 1..93 CDD:278594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..303
Glycolipid transfer protein homology domain 311..520 56/210 (27%)
GLTP 334..471 CDD:285880 39/143 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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