DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and prlh2r

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001108619.1 Gene:prlh2r / 797157 ZFINID:ZDB-GENE-120411-41 Length:371 Species:Danio rerio


Alignment Length:339 Identity:75/339 - (22%)
Similarity:143/339 - (42%) Gaps:50/339 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 FLP----LIAFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDFY---- 94
            |:|    |:.....||..::.:|..|:.|.|.||.:|.|:|:.||:....|..:   ..||    
Zfish    37 FIPLYTMLVLIACSGNLLLLILIGLNKKLHSTTNFLIGNLALVDLVMCLFCVPL---TAFYAFDE 98

  Fly    95 QNYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVCTWVSGIL 159
            :.:..|...|.....:....:..|||:|:.::.||...:..|:..|........:||..|:..:.
Zfish    99 RGWVFGQFMCHFVTLMQTATVFAAVLSLTAIAVDRYVVVAYPIRRRGGRWFCGWLVVSIWLCALA 163

  Fly   160 LASPLAFYRSY--------RVRVWKNFTERYCKENTSVLPKYWYVLITILVWLPLGIMLICYIAI 216
            :::|.|.:..|        .:.|.:.|.  :.:|.:.::...:::|::..|  ||..:.|.|.||
Zfish   164 MSTPTALHTVYLDLSETGHEMAVCEEFW--HGQELSRLIYSCFFLLLSYFV--PLAAVSISYCAI 224

  Fly   217 FYKLDRYEKRVLSRENPLTVS-------YKRSVAKTLFIVVVVFAALRLPFTILVVLREKYFGED 274
            ...|   :.|...|....|.|       .:|...:.|.:.|:.||...||..|:.::|:  ...|
Zfish   225 SCHL---QHRATPRLMAATPSNQEKWGRKRRKTFRLLLVSVLSFAFSWLPLQIVNLIRD--LDTD 284

  Fly   275 VSVSSGMQL-FWYISQYLMFLNAA-VNPLIYGFNNENFRRAYYQISWVRRWRDATQMKKFSRSPD 337
            .::.|...: ...:|.:|:.:::| .||.||...::.|      :|::..       ..|.:...
Zfish   285 FAILSKNHVNVIQVSCHLLAMSSACYNPFIYASLHKKF------LSYLCH-------NMFQKRKA 336

  Fly   338 HCCYCAFMKNGKRT 351
            ||...:...:.:.|
Zfish   337 HCTQSSITTSSRMT 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 70/300 (23%)
TM helix 1 33..59 CDD:320131 6/24 (25%)
TM helix 2 66..91 CDD:320131 8/24 (33%)
TM helix 3 104..134 CDD:320131 7/29 (24%)
TM helix 4 145..166 CDD:320131 4/20 (20%)
TM helix 5 190..219 CDD:320131 8/28 (29%)
TM helix 6 237..267 CDD:320131 9/36 (25%)
TM helix 7 282..307 CDD:320131 7/26 (27%)
prlh2rNP_001108619.1 7tmA_PrRP_R 35..326 CDD:320516 71/306 (23%)
TM helix 1 36..62 CDD:320516 6/24 (25%)
TM helix 2 69..94 CDD:320516 8/27 (30%)
TM helix 3 108..138 CDD:320516 7/29 (24%)
TM helix 4 149..170 CDD:320516 4/20 (20%)
TM helix 5 198..227 CDD:320516 8/30 (27%)
TM helix 6 249..279 CDD:320516 8/29 (28%)
TM helix 7 294..319 CDD:320516 7/24 (29%)

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