DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and PRLHR

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_004239.2 Gene:PRLHR / 2834 HGNCID:4464 Length:370 Species:Homo sapiens


Alignment Length:332 Identity:88/332 - (26%)
Similarity:148/332 - (44%) Gaps:64/332 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LHKPNGEITWKICTFLPLIAFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMF 88
            :|:..|.|   :..:..::..||.||..:|.|||..|.|.:.||.:|.|:|::|:|....|..:.
Human    56 VHQLKGLI---VLLYSVVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLT 117

  Fly    89 MVNDFY-QNYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVC 152
            :...|. :.:..|...|.|..||..|.:..:|..|:.::.||...:|.|:..|:::|.....|:.
Human   118 LAYAFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLRLSAYAVLA 182

  Fly   153 TWVSGILLASPLAFYRSYRVRVWKNFTERYCKENTSVLPKYW-------------YVLITILVWL 204
            .|....:||.|.|.: :|.|.: |....|.|:|       :|             .:|:|.|  |
Human   183 IWALSAVLALPAAVH-TYHVEL-KPHDVRLCEE-------FWGSQERQRQLYAWGLLLVTYL--L 236

  Fly   205 PLGIMLICYIAIFYKLDRYEKRVLSRENPLTVSY---------KRSVAKTLFIVVVVFAALRLPF 260
            ||.::|:.|:.:..||   ..||:    |..|:.         :|.....|.::|||||...||.
Human   237 PLLVILLSYVRVSVKL---RNRVV----PGCVTQSQADWDRARRRRTFCLLVVIVVVFAVCWLPL 294

  Fly   261 TILVVLR-------EKY-FGEDVSVSSGMQLFWYISQYLMFLNAAVNPLIYGFNNENFRRAYYQ- 316
            .:..:||       :.| ||          |...:..:|...:|..||.||.:.:::||....: 
Human   295 HVFNLLRDLDPHAIDPYAFG----------LVQLLCHWLAMSSACYNPFIYAWLHDSFREELRKL 349

  Fly   317 -ISWVRR 322
             ::|.|:
Human   350 LVAWPRK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 83/311 (27%)
TM helix 1 33..59 CDD:320131 8/25 (32%)
TM helix 2 66..91 CDD:320131 8/24 (33%)
TM helix 3 104..134 CDD:320131 9/29 (31%)
TM helix 4 145..166 CDD:320131 5/20 (25%)
TM helix 5 190..219 CDD:320131 9/41 (22%)
TM helix 6 237..267 CDD:320131 9/38 (24%)
TM helix 7 282..307 CDD:320131 7/24 (29%)
PRLHRNP_004239.2 TM helix 4 175..196 CDD:320516 5/20 (25%)
TM helix 5 222..251 CDD:320516 8/30 (27%)
TM helix 6 271..301 CDD:320516 9/29 (31%)
TM helix 7 314..339 CDD:320516 8/34 (24%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000269|PubMed:11641419 365..370
7tmA_PrRP_R 77..346 CDD:320516 81/296 (27%)
TM helix 2 95..120 CDD:320516 8/24 (33%)
TM helix 3 134..164 CDD:320516 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.

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