DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and Prlhr

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_963909.2 Gene:Prlhr / 226278 MGIID:2135956 Length:370 Species:Mus musculus


Alignment Length:332 Identity:91/332 - (27%)
Similarity:147/332 - (44%) Gaps:64/332 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LHKPNGEITWKICTFLPLIAFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMF 88
            :|:..|.|   :..:..::..||.||..:|.|||..|.|.:.||.:|.|:|::|:|..|.|..:.
Mouse    56 VHQLKGLI---VMLYSIVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCAACVPLT 117

  Fly    89 MVNDFY-QNYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVC 152
            :...|. :.:..|...|.|..||..|.:..:|..|:.::.||...:|.|:..|:::|.....|:.
Mouse   118 LAYAFEPRGWVFGGGLCHLVFFLQPVTVYVSVFTLTTIALDRYVVLVHPLRRRISLRLSAYAVLG 182

  Fly   153 TWVSGILLASPLAFYRSYRVRVWKNFTERYCKENTSVLPKYW-------------YVLITILVWL 204
            .|....:||.|.|.: :|.|.: |......|:|       :|             .:|.|.|  |
Mouse   183 IWALSAVLALPAAVH-TYHVEL-KPHDVSLCEE-------FWGSQERQRQIYAWGLLLGTYL--L 236

  Fly   205 PLGIMLICYIAIFYKLDRYEKRVLSRENPLTVSY---------KRSVAKTLFIVVVVFAALRLPF 260
            ||..:|:.|:.:..||   ..||:    |.:|:.         :|.....|.:||||||...||.
Mouse   237 PLLAILLSYVRVSVKL---RNRVV----PGSVTQSQADWDRARRRRTFCLLVVVVVVFAVCWLPL 294

  Fly   261 TILVVLR-------EKY-FGEDVSVSSGMQLFWYISQYLMFLNAAVNPLIYGFNNENFRRAYYQ- 316
            .|..:||       :.| ||          |...:..:|...:|..||.||.:.:::||....: 
Mouse   295 HIFNLLRDLDPRAIDPYAFG----------LVQLLCHWLAMSSACYNPFIYAWLHDSFREELRKM 349

  Fly   317 -ISWVRR 322
             :||.|:
Mouse   350 LLSWPRK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 85/311 (27%)
TM helix 1 33..59 CDD:320131 8/25 (32%)
TM helix 2 66..91 CDD:320131 9/24 (38%)
TM helix 3 104..134 CDD:320131 9/29 (31%)
TM helix 4 145..166 CDD:320131 5/20 (25%)
TM helix 5 190..219 CDD:320131 9/41 (22%)
TM helix 6 237..267 CDD:320131 11/38 (29%)
TM helix 7 282..307 CDD:320131 7/24 (29%)
PrlhrNP_963909.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
7tmA_PrRP_R 61..346 CDD:320516 87/315 (28%)
TM helix 1 62..88 CDD:320516 9/28 (32%)
TM helix 2 95..120 CDD:320516 9/24 (38%)
TM helix 3 134..164 CDD:320516 9/29 (31%)
TM helix 4 175..196 CDD:320516 5/20 (25%)
TM helix 5 222..251 CDD:320516 8/30 (27%)
TM helix 6 271..301 CDD:320516 11/29 (38%)
TM helix 7 314..339 CDD:320516 8/34 (24%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000250 365..370
Blue background indicates that the domain is not in the aligned region.

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