DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and npr-6

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_509725.2 Gene:npr-6 / 185623 WormBaseID:WBGene00009619 Length:402 Species:Caenorhabditis elegans


Alignment Length:333 Identity:84/333 - (25%)
Similarity:149/333 - (44%) Gaps:64/333 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GNFSMVYVIATNRSLRSPTNLIIANMAVADLL----TLAICPAMFMVNDFYQNYQLGCVGCKL-E 107
            |||.:|||:.||:.:::.||:.|.|:||:|::    :|.:.|....:..:.....| |.|..| :
 Worm    54 GNFLVVYVVMTNKRMQTITNIFITNLAVSDIMVNFTSLWLTPTYTSIGHWIFGGGL-CHGLPLFQ 117

  Fly   108 GFLVVVFLITAVLNLSVVSYDRLTAIV-----LPMETRLTIRGVQIVVVCTWVSGILLASPLAFY 167
            |  ..:|:.|  ..|:.::.||...||     :.:..|:::|.....:|..|:..:||.:|    
 Worm   118 G--TSIFIST--WTLTAIAIDRYIVIVHNSSNININDRMSMRSCLSFIVLIWLCSLLLVTP---- 174

  Fly   168 RSYRVRVWKNFTERYCK--------ENTSVLPKYWYVLITILVWLPLGIMLICYIAIFYKLDRYE 224
              |.:.:..|:....|.        .|......:..|::.:...||..::.|.||.|:..|:   
 Worm   175 --YAINMKLNYIHEPCDFLICSEDWSNAEFRSIFGIVVMILQFILPFVLIAISYIKIWLFLN--- 234

  Fly   225 KRVLSRENPLTVSYKRSVAKTLFIVVVVFAALRLPFTILVVLREKYFGEDVSVSSGMQ---LFWY 286
            .|....|....:..|:.:.:.|.::||:||....||.:|..||      |:.:.:.|:   .|.:
 Worm   235 SRQSMTERKSDIKRKKRLLRMLIVMVVIFAICWFPFNLLNCLR------DLKLDNFMRGYFSFVF 293

  Fly   287 ISQYLMFLNA-AVNPLIYGFNNENFRRAYYQI---SWVRR-------------------WRDATQ 328
            :|.:||.:.| |.||::|.|.||.||..:.::   .:.||                   :|.|.:
 Worm   294 LSVHLMSMTATAWNPILYAFMNETFREEFAKVVPCLFARRPGTGPIRVITERTAMITNPFRRANR 358

  Fly   329 MKKFSRSP 336
            .||....|
 Worm   359 KKKVEEQP 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 77/287 (27%)
TM helix 1 33..59 CDD:320131 6/10 (60%)
TM helix 2 66..91 CDD:320131 9/28 (32%)
TM helix 3 104..134 CDD:320131 7/30 (23%)
TM helix 4 145..166 CDD:320131 5/20 (25%)
TM helix 5 190..219 CDD:320131 7/28 (25%)
TM helix 6 237..267 CDD:320131 9/29 (31%)
TM helix 7 282..307 CDD:320131 10/28 (36%)
npr-6NP_509725.2 7tmA_NPYR-like 39..322 CDD:320331 77/287 (27%)
TM helix 1 39..65 CDD:320331 6/10 (60%)
TM helix 2 72..97 CDD:320331 9/24 (38%)
TM helix 3 110..140 CDD:320331 9/33 (27%)
TM helix 4 156..177 CDD:320331 6/26 (23%)
TM helix 5 203..232 CDD:320331 7/28 (25%)
TM helix 6 247..277 CDD:320331 9/29 (31%)
TM helix 7 290..315 CDD:320331 10/24 (42%)

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