DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30340 and si:dkey-202l22.3

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001108620.1 Gene:si:dkey-202l22.3 / 100002553 ZFINID:ZDB-GENE-131127-471 Length:377 Species:Danio rerio


Alignment Length:306 Identity:72/306 - (23%)
Similarity:125/306 - (40%) Gaps:43/306 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 FLPLIAFGL----YGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDF-YQNY 97
            |:||.|..:    .||..::..|..::.|.:.||..|.|:|..|||....|..:.....| .|.:
Zfish    41 FIPLYALVVVVAGVGNSFLLACILADKKLHNATNFFIGNLAAGDLLMCLSCVPLTASYAFDAQGW 105

  Fly    98 QLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVCTWVSGILLAS 162
            ..|...|.|...:....:..:||:|:.::.||...:..|:..|:::.|...|.:..|...:.||:
Zfish   106 AFGRPMCHLIPLVQGATVFASVLSLTAIAMDRYVVVAYPVRRRISVWGCGAVALGVWAVSLALAA 170

  Fly   163 PLAFYRSY--------RVRVWKNFTERYCKENTSVLPKYWYVLITILVWLPLGIMLICYIAIFYK 219
            |.:.:..|        .:.|.:.|.  ...|...:|...:::|.:.::  ||..:.|.|.||...
Zfish   171 PPSLHTRYVDLRPSGMELVVCEEFW--LGAERQRLLYSCFFLLASYMI--PLLSVSISYCAISVH 231

  Fly   220 LDRYEKRVL----SRENPLTVSYKRSVAKTLFIVVVVFAALRLPFTILVVLREKYFGEDVSVSSG 280
            |   .|..|    |:........:|.....|...|:.||...||..:|.:|        :.:.|.
Zfish   232 L---RKHTLPGEPSQSQQRWSKQRRKTFSLLVASVLAFALCWLPLQVLNLL--------LDLDSD 285

  Fly   281 MQL-------FWYISQYLMFLNAA-VNPLIYGFNNENFR---RAYY 315
            .|:       ...:|.:|:.:::| .||.||...:...|   |.|:
Zfish   286 FQIVDKHYVNVLQVSCHLIAMSSACYNPFIYASLHSKVRMHLRGYF 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 71/303 (23%)
TM helix 1 33..59 CDD:320131 7/24 (29%)
TM helix 2 66..91 CDD:320131 9/24 (38%)
TM helix 3 104..134 CDD:320131 7/29 (24%)
TM helix 4 145..166 CDD:320131 6/20 (30%)
TM helix 5 190..219 CDD:320131 8/28 (29%)
TM helix 6 237..267 CDD:320131 8/29 (28%)
TM helix 7 282..307 CDD:320131 8/32 (25%)
si:dkey-202l22.3NP_001108620.1 7tm_GPCRs 39..327 CDD:475119 70/300 (23%)
TM helix 1 41..65 CDD:410628 7/23 (30%)
TM helix 2 74..96 CDD:410628 8/21 (38%)
TM helix 3 113..135 CDD:410628 4/21 (19%)
TM helix 4 156..172 CDD:410628 4/15 (27%)
TM helix 5 203..226 CDD:410628 5/24 (21%)
TM helix 6 256..278 CDD:410628 7/21 (33%)
TM helix 7 295..320 CDD:410628 7/24 (29%)

Return to query results.
Submit another query.