DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30338 and RWDD3

DIOPT Version :10

Sequence 1:NP_724811.1 Gene:CG30338 / 246548 FlyBaseID:FBgn0050338 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_056300.3 Gene:RWDD3 / 25950 HGNCID:21393 Length:267 Species:Homo sapiens


Alignment Length:249 Identity:60/249 - (24%)
Similarity:97/249 - (38%) Gaps:66/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EELELLSSIYCAPGELHMLDAGVVADFNEFLKDDKTKP------ATSLLSHLEYVVKLTLPG--- 73
            |||.:|::|:|.|.|..:|... ..|...|....|.:.      ...|:.||.......|||   
Human     7 EELSVLAAIFCRPHEWEVLSRS-ETDGTVFRIHTKAEGFMDVDIPLELVFHLPVNYPSCLPGISI 70

  Fly    74 -------KQCVEVRVELPHLYPLLEQARVSVHTTLLGKSKEQRLKNDLEQYHGERREEDAEPYIF 131
                   .|||.|:..      |||||.     :||                       :||.:.
Human    71 NSEQLTRAQCVTVKEN------LLEQAE-----SLL-----------------------SEPMVH 101

  Fly   132 QLLSWLQDRIEDLLKRPASEFEVQQVASSDPQQPPATELQRIWI---YSHHIKSSAKRQELIRQ- 192
            :|:.|:|..:..:|.:|.:....::...|    ...|....:||   :..|:::..|..:::.: 
Human   102 ELVLWIQQNLRHILSQPETGSGSEKCTFS----TSTTMDDGLWITLLHLDHMRAKTKYVKIVEKW 162

  Fly   193 ARQLELTG-FSRPGKPGIICVEGDSANVQEFWRTIKALRWQKISVVRTEPRQRK 245
            |..|.||| ....||..:|.::||..|::|:      |..||.|.|..:...:|
Human   163 ASDLRLTGRLMFMGKIILILLQGDRNNLKEY------LILQKTSKVDVDSSGKK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30338NP_724811.1 RWD_DRWD_ELF-like 22..145 CDD:480265 31/138 (22%)
RWDD2_C 170..286 CDD:467814 22/81 (27%)
RWDD3NP_056300.3 RWD_RWDD3 7..112 CDD:467655 34/139 (24%)
Interaction with UBE2I/UBC9. /evidence=ECO:0000269|PubMed:25918163 13..15 0/1 (0%)
Interaction with UBE2I/UBC9. /evidence=ECO:0000269|PubMed:25918163 100..102 0/1 (0%)
RWDD3_C 139..247 CDD:467815 22/78 (28%)

Return to query results.
Submit another query.