DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS1 and C01B4.8

DIOPT Version :10

Sequence 1:NP_726254.1 Gene:MFS1 / 246519 FlyBaseID:FBgn0050272 Length:497 Species:Drosophila melanogaster
Sequence 2:NP_503682.1 Gene:C01B4.8 / 182055 WormBaseID:WBGene00015272 Length:478 Species:Caenorhabditis elegans


Alignment Length:480 Identity:112/480 - (23%)
Similarity:192/480 - (40%) Gaps:54/480 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RHLQTFLLFLSIVVNYMAKFNAGVAVVAMTNAEN----TNPNFPEYDWNEME--RSYILSSFFWG 72
            |:|...|....:.:..|........|:.|::..:    |:||  |..|.|..  :|.:.||...|
 Worm    34 RYLILILTLTCLTLLQMNSLAFNFTVICMSDVSDDYHITHPN--ETHWFEDSNMKSLVFSSMAVG 96

  Fly    73 YILTQFMGGWLCRRYGARITMFVSTIGSALLVVLIPWCVSWGGWQAYCAIRMSMGLFQGFLFPCI 137
            .:|...:...|..|.|.|:.:.:..:.|.|..:|.|..|.| .:.:...:|...||....:|..:
 Worm    97 GLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAVEW-NFFSVLVVRFLQGLGISMVFTVL 160

  Fly   138 HAHLANWCPVKERNRLGALANTGIDCGTLVAMFASGLLAASSIGWPGIFYVSCGVGVLWCIVWWI 202
            .:....|.|..|.....|:.:.......::.|..||.|..||.||..|:|:...|.:::.:.::.
 Worm   161 GSVPTAWAPNNESGTFLAVLSCAFQWSNVICMPISGFLCESSWGWRSIYYLFGIVTIVFFLAFYF 225

  Fly   203 FGANQPRESKFIGEAELNYIETSINSSRKAEEAELKATGPIPVPWKAIWTSVPFWALMVTRCCQS 267
            |..:.|.:.:.:...||:.|......:.|.           |||:.||..........::....:
 Worm   226 FYTDSPTDHRNVSNKELSLILQDKTVTHKE-----------PVPYLAICKDPCVLVTWMSNIGGN 279

  Fly   268 WGYSTLQTEMPAYMNGVLLMDMKSNALYSALPYLTSWVMAFVYLII------ADILLTRGIMSIT 326
            .|:.||....|.|:..||..:::.....||||:|.|   |.|..|.      .|.:..|...:|.
 Worm   280 LGFLTLVLYGPTYLREVLNFEVRGTGFASALPFLLS---AAVKSIAGQLSDRCDFVSERVRFTIC 341

  Fly   327 GIRKSVNSIAFFVPAAALIGVSFLDNTQKTLAVVLMCANVGINAGSTIGSTINTIDL-SPNHAGI 390
            ||      :|....|...||::  ..:.:.:|.:....::.: :|..|..|:..:.| ...|...
 Worm   342 GI------VARLGLAIGYIGMA--TTSSRLVAQIAFTFSIAV-SGLNIMGTVKCLQLRCKQHVHF 397

  Fly   391 LMGIVNTASNIVPILTPLLVGIIVKDDHDREQWQIVFIISAVIFCVGNIVYVAFGKMVNQPW--- 452
            .:.::...:.::....|:|||||. .|:..|||...|:|      ||.||:|.....   ||   
 Worm   398 AVSVIALMAYVIQFGAPILVGIIC-PDNTAEQWGWFFLI------VGIIVFVTSAPF---PWFTT 452

  Fly   453 -DAPDFMDKQRSSNLQEVGHSKALE 476
             :..|: ...|...|:...|.:..|
 Worm   453 AEPADY-TLSREKQLEIAKHKELQE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS1NP_726254.1 MFS_SLC17 18..445 CDD:340876 103/439 (23%)
C01B4.8NP_503682.1 MFS 56..443 CDD:475125 100/419 (24%)

Return to query results.
Submit another query.