DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG30203 and CG42339

Sequence 1:NP_725128.2 Gene:CG30203 FlyBaseID:FBgn0050203 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_572674.3 Gene:CG42339 FlyBaseID:FBgn0259241 Length:395 Species:Drosophila melanogaster

Alignment Length:62 Identity:23/63 (37%)
Similarity:31/63 (49%) Gaps:11/63 (17%)


  Fly   486 ECQLTNWGEWSPCTKTCGRGSSTRTRDYYNPQARQ----RCLSVMRIPLEETRECIGSDCGG 543
            :||:.:||.||.|.::||.|..||.|...  ||.|    .|.:     |::.|.|.|..|.|
  Fly    83 DCQVGDWGAWSECDRSCGTGMMTRNRQIL--QAAQNGGKHCPT-----LQQKRSCQGYRCHG 137

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG30203NP_725128.2 Reeler 18..160 CDD:260081
Spond_N 183..372 CDD:283999
TSP1 411..459 CDD:214559
TSP1 492..541 CDD:214559 19/53 (36%)
KU <739..773 CDD:197529
CG42339NP_572674.3 Somatomedin_B <53..79 CDD:279385
TSP1 86..136 CDD:214559 20/57 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3539
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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