DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP3 and TEF4

DIOPT Version :10

Sequence 1:NP_660194.1 Gene:AIMP3 / 246507 FlyBaseID:FBgn0050185 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_012842.1 Gene:TEF4 / 853781 SGDID:S000001564 Length:412 Species:Saccharomyces cerevisiae


Alignment Length:203 Identity:40/203 - (19%)
Similarity:62/203 - (30%) Gaps:74/203 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ATVQKIANCLGVNPGKVQLNEEQVVTRTSGQKKSVAGFASILESLASESK--SETAQNSRASREV 67
            |.|:.....|...|.|.|..|:....::..:||.            .|:|  .:.|...:....:
Yeast   203 AEVKLAEKALTYTPPKKQKAEKPKAEKSKAEKKK------------DEAKPADDAAPAKKPKHPL 255

  Fly    68 EA-----------------------------QVYQWIEFSVLYVAPGSKDK----YVSKQLLAD- 98
            ||                             :.|...|:|:..|.....|:    ::|..|:.. 
Yeast   256 EALGKSTFVLDDWKRKYSNDDTRPVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGF 320

  Fly    99 FNKLFASKSYLVG----------------------HFITLADLAVYYAIYDLVKSLSPV---DKE 138
            ||:|.||..|:.|                      .|....|:|..:..|:..| |.|.   |||
Yeast   321 FNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAFDVAPDWESYEYTK-LDPTKEEDKE 384

  Fly   139 VYLNLSRW 146
            ...|:..|
Yeast   385 FVNNMWAW 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP3NP_660194.1 GST_C_AIMP3 65..166 CDD:198338 28/141 (20%)
TEF4NP_012842.1 GST_N_EF1Bgamma 4..72 CDD:239342
GST_C_EF1Bgamma_like 89..211 CDD:198290 2/7 (29%)
EF1G 253..356 CDD:459888 16/102 (16%)
Blue background indicates that the domain is not in the aligned region.

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