DRSC/TRiP Functional Genomics Resources

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Protein Alignment NT5E-2 and SMN1

DIOPT Version :10

Sequence 1:NP_611218.1 Gene:NT5E-2 / 246458 FlyBaseID:FBgn0050104 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_012072.3 Gene:SMN1 / 856609 SGDID:S000001245 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:632 Identity:119/632 - (18%)
Similarity:212/632 - (33%) Gaps:198/632 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LHNNDMH----ARFDQTSVNSGTCPPEDVHTNKCYGGFARVAHEVR-KYRKEAQEGGTSVLYLNA 95
            :|..|.|    :...|...::.            :|.|......:| |..:::::    |:.::.
Yeast    47 IHTTDTHGWLGSHLSQNDYDAD------------WGDFVAFVDILREKILRQSRD----VIVIDT 95

  Fly    96 GDTYTG-----TSWFTIFKDKIASAFLNKLKPDAISLGNHEFDERVEGLIPFLNEVTFPVLACNL 155
            ||...|     .:|....:   :|...|.:..|.::|||||.......::.:..           
Yeast    96 GDKRDGNGLSDATWPPGLR---SSEIFNMMDYDLLTLGNHELYTAESAILEYRG----------- 146

  Fly   156 DLSKVPQLKATWHLANSAILETNGTKV----GVIGYLTPDTKKLTLNMDVEFN------------ 204
             .|:..:.|..:..:|...:|.:||:|    ..|.:.||..|:..|.:...|:            
Yeast   147 -TSQSSKFKDKYVCSNVEFIEDDGTRVPFGNKYITFETPIMKQRVLALSFLFSFQRANNRAIVTP 210

  Fly   205 --EEVESIN-----VEAKKLKAQGIKIIIALGHSGYLKDLE---------IAKNCPEVDI-VIGG 252
              ||:...:     ||..  :.:.|.:||..||.......|         |.|..|...| ..||
Yeast   211 PLEEITQKSWFQNMVETN--REEEIDLIIVFGHLPATDPTEREMHKIHALIRKYYPNTVIQYFGG 273

  Fly   253 HT-----------NTFLYTGAQPD---------AEHIDGPYPTMVKQ--NSGKEVPVVQAYAYTK 295
            ||           :|.|.:|...:         .:.:|...|...::  :..||       |:..
Yeast   274 HTHIRDFVQLDSKSTCLQSGRFAETVGFLSINMTDPVDAESPIFSRRYIDFNKE-------AFKY 331

  Fly   296 YLGKL-HVQFDADGNLIQWDGSPILLNASVAQEQDLLDLLEVFRPNVTRLEKSVVGHTKVHLEGN 359
            :|.|| |     |.|:      |:    |..:.:.:..|:...|..:...||  :|:.......:
Yeast   332 HLSKLGH-----DSNV------PV----STKKGKTISRLVNDLRHELNLNEK--LGYIPQTYYVS 379

  Fly   360 KAVCRAEECNLGNLIADAMV------------FSRLMEEQGGDFWTDAAISIMQGGGIRSSIEKR 412
            .....:|| ||.:||...::            .||.:              ::..|.:|..:.| 
Yeast   380 TRPLNSEE-NLYHLITHKILPNLIPPKNYEPSMSRFI--------------LINTGSVRYDLYK- 428

  Fly   413 SDGAITDNDILSVLPWGN--KLYMVPM-TGSTIRRALEHGAALRG---------KDSDGGFLQVS 465
              |..|.:....|:|:.|  :...||: ..|.:...|..|..:..         |...|||.:..
Yeast   429 --GPFTKDTEYIVMPFNNDWRFITVPLVVASRVETYLNKGPVIASLGIPSSSHHKQHFGGFQKCP 491

  Fly   466 GIRVVFNSNKPEG------------------QRVVSVQ--VRCAACRVPTYSDLNDTAIYNVVLG 510
            .|.   |.|..||                  ||...:.  |:|...:.....:.:.:.:.:|:..
Yeast   492 FIN---NPNLSEGYTTEDDFGCHGDDTPHNSQREYDIPNVVQCKEVKKVQEEEADPSKMVHVIFY 553

  Fly   511 EFL-LD--GGDGHVMRDSAHQPQRLQNNDL-----EAVSQYLNQRDY 549
            .|: ||  .....::.|...:.:.|..||.     ::..:.|  |||
Yeast   554 SFMELDILNAVNSIINDLGLRMENLTTNDCSHYGGDSTKKLL--RDY 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NT5E-2NP_611218.1 MPP_CD73_N 33..320 CDD:277354 67/349 (19%)
5_nucleotid_C 348..519 CDD:427027 39/217 (18%)
SMN1NP_012072.3 MPP_YHR202W_N 39..325 CDD:277352 57/310 (18%)

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