DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30098 and modSP

DIOPT Version :10

Sequence 1:NP_725573.2 Gene:CG30098 / 246456 FlyBaseID:FBgn0050098 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:251 Identity:68/251 - (27%)
Similarity:104/251 - (41%) Gaps:53/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GGQNARRT--PWMAYLI-----RDNRFACGGSLIAYRFVLTAAHCTKINDNLFVRLG-EYDSSR- 94
            ||.....|  ||...|.     :|..|.|||||:....|:|||||  :.|. ..||. .||:.| 
  Fly   371 GGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHC--VYDE-GTRLPYSYDTFRV 432

  Fly    95 ------------TTDGQTRSYRVVSIY-----RHKNYIDFRNHDIAVLKLDRQVVYDAYIRPICI 142
                        |.:.:.|..|::.|.     |.:||.    .|:|:|.||........|||||:
  Fly   433 IAAKFYRNYGETTPEEKRRDVRLIEIAPGYKGRTENYY----QDLALLTLDEPFELSHVIRPICV 493

  Fly   143 LLNS--GLQSLANSIQNFTLTGWG-QMAHYYK-MPTTLQEMSL--RRVRNEYCGVPSLSICCWNP 201
            ...|  ..:|:.:.:|. ...||. :..|..: :|...:..|:  |.:|:    :.:...|.:..
  Fly   494 TFASFAEKESVTDDVQG-KFAGWNIENKHELQFVPAVSKSNSVCRRNLRD----IQADKFCIFTQ 553

  Fly   202 -VQYACFGDSGG------PLGSLVKYGHKTIYVQFGVTNSVTGNCDGYSSYLDLMS 250
             ...||.|||||      |..:...:.....:: |||.::.. |.|..:..|.:|:
  Fly   554 GKSLACQGDSGGGFTSELPTNAFSTWNTARHFL-FGVISNAP-NADQCAHSLTVMT 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30098NP_725573.2 Tryp_SPc 37..258 CDD:238113 68/251 (27%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 68/251 (27%)
Blue background indicates that the domain is not in the aligned region.

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