DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30082 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:288 Identity:90/288 - (31%)
Similarity:125/288 - (43%) Gaps:42/288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLWIASFAFLVCLTPKLRAQFIDPNCGTTINLPPTN--RIVGGRTADIGSNPWLAYLHKNSSLVC 65
            :|.||....:..||.:.....:...||...:|...:  ||:||..|:.|..||...|..|:...|
  Rat   147 NLEIAPSNEITSLTDQDTENVLTQECGARPDLITLSEERIIGGTQAETGDWPWQVSLQLNNVHHC 211

  Fly    66 TGTLITKRFVLTAAHCLHSF---HLLTVRLGEYDTSTRIDCTSEFCIPTYEEYSVENAYIHTFFG 127
            .||||:..:|||||||..|:   ...|...|....|.|:.......:...|..|:..        
  Rat   212 GGTLISNLWVLTAAHCFRSYSNPQQWTATFGVSTISPRLRVRVRAILAHAEYNSITR-------- 268

  Fly   128 GRQDSRNDIGLLKLNGTVVYKLFIRPICLFRDPGQ----VPYSSTYEAAGWGKIDL-INTATVLQ 187
                 .|||.:::|:..|.:...|..:||   |..    :|.|..| ..|||.:.. .||.|.||
  Rat   269 -----DNDIAVVQLDRPVTFTRNIHRVCL---PAATQNIIPDSVAY-VTGWGSLTYGGNTVTNLQ 324

  Fly   188 --TVNLIRLDQSDCERSLRTSLSYGQFCAG--QWRADTCSGDSGGPLSRKMSNGRITRTV--QLG 246
              .|.::..:..:.......|:..|..|||  ....|.|.|||||||.::     .||.:  .:|
  Rat   325 QGEVRIVSSEVCNEPAGYGGSVLPGMLCAGVRSGAVDACQGDSGGPLVQE-----DTRRLWFVVG 384

  Fly   247 IVSYGHYLC---RGPGVYTYVPSFTNWI 271
            |||:| |.|   ..|||||.|.::.|||
  Rat   385 IVSWG-YQCGLPNKPGVYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 81/249 (33%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 81/249 (33%)
Blue background indicates that the domain is not in the aligned region.

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