DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30062 and Spaca5

DIOPT Version :8

Sequence 1:NP_725299.2 Gene:CG30062 / 246428 FlyBaseID:FBgn0050062 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_001101528.1 Gene:Spaca5 / 314431 RGDID:1584964 Length:160 Species:Rattus norvegicus

Alignment Length:123 Identity:40/124 (32%)
Similarity:60/124 (48%) Gaps:24/124 (19%)


  Fly    32 CELAGQLYILDVPKSEL--------PLWLCIAEFESRFNTHVVGQANADGSRDYGLFQISDRYWC 88
            ||||.:|     .|:.|        ..|||:|.:||.|:|..|.. |.|||.:||:||::..:||
  Rat    27 CELARKL-----EKAGLNGFKGYTVGDWLCVAHYESGFDTSFVDH-NPDGSSEYGIFQLNSAWWC 85

  Fly    89 ---APPNRTEYYAFNDCNVNCTHLLSDDITMAVQCA-RLIQKQQGWTAWSVYPEFCNG 142
               ..|.:      |.|:::|..||:..|...:.|| |::...:...||..:...|.|
  Rat    86 NNGITPTQ------NLCHMDCNDLLNRHILDDIMCAKRVVSSHKSMKAWDSWTRHCAG 137

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG30062NP_725299.2 lysozyme_like 32..150 CDD:294153 40/124 (32%)
Spaca5NP_001101528.1 LYZ1 22..145 CDD:238066 40/124 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C48394817
eggNOG 1 0.900 E1_2BPI7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000203
OrthoInspector 1 1.000 T131092
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11407
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.