DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30062 and Spaca3

DIOPT Version :10

Sequence 1:NP_725299.2 Gene:CG30062 / 246428 FlyBaseID:FBgn0050062 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_001099290.1 Gene:Spaca3 / 287557 RGDID:1306684 Length:163 Species:Rattus norvegicus


Alignment Length:127 Identity:47/127 - (37%)
Similarity:63/127 - (49%) Gaps:14/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CELAGQLYILDVP---KSELPLWLCIAEFESRFNTHVVGQANADGSRDYGLFQISDRYWC--APP 91
            ||||..|:...:.   ...|..|:|:|.:.|.|||..|.. .||||.:.|:||||.|.||  ..|
  Rat    41 CELAKVLHDFGLEGYRGYNLADWICLAYYTSGFNTDAVDH-EADGSTNNGIFQISSRKWCKNLAP 104

  Fly    92 NRTEYYAFNDCNVNCTHLLSDDITMAVQCA-RLIQKQQGWTAWSVYPEFCNG--TLDAIDVC 150
            |..     |.|.:.||.|||:|:..:|.|. ::.|:.||...|..:...|.|  ..|.:|.|
  Rat   105 NGP-----NLCRIYCTDLLSNDLKDSVACVMKIAQEPQGLGYWESWKHHCQGRDLSDWVDGC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30062NP_725299.2 LYZ_C_invert 29..150 CDD:381618 46/125 (37%)
Spaca3NP_001099290.1 LYZ_C 36..161 CDD:340383 46/125 (37%)

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