DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Aa and Lcp1

DIOPT Version :10

Sequence 1:NP_001097285.1 Gene:Cpr49Aa / 246413 FlyBaseID:FBgn0050045 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:134 Identity:50/134 - (37%)
Similarity:73/134 - (54%) Gaps:13/134 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YTLLFIAALLLSLAQARPQV---RGQAPGEPIPIIRQEQEVNFDGSYKYLYETGNGINAEEEGYL 64
            :..:.|.| :|.||.|.|.|   .|::......::.|..:|..||....|: |.|||.....|  
  Fly     2 FKFVMICA-VLGLAVANPPVPHSLGRSEDVHADVLSQSDDVRADGFDSSLH-TSNGIEQAASG-- 62

  Fly    65 KNPGTDNAGQVAQGSFSYTSPEGIPIRITYLADENGFQPQGDHLPTPPPIPPAIQKALAYLATAP 129
                 |..|.: .|:|.:.||||..:.:.|:|:|||:||.|..:|||||||.||.:|:|:|.:.|
  Fly    63 -----DAHGNI-HGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHP 121

  Fly   130 PPPQ 133
            |.|:
  Fly   122 PAPE 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AaNP_001097285.1 Chitin_bind_4 46..101 CDD:459790 18/54 (33%)
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 18/55 (33%)

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