DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30025 and intr

DIOPT Version :10

Sequence 1:NP_725036.1 Gene:CG30025 / 246398 FlyBaseID:FBgn0050025 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster


Alignment Length:256 Identity:57/256 - (22%)
Similarity:102/256 - (39%) Gaps:43/256 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSAVACALGGTVPEGL--LP-QLDGRIVGGSATT-----ISSFPWQISLQRSGSHSCGGSIYSSN 64
            :||...:.|...|..|  :| :::..:..|.|||     :..|..:|..:  ....|.|::.|:.
  Fly    59 ISARFSSGGNKEPNSLEIIPAEIETLLTDGQATTEAPKAVKHFVMRILYE--NKVICSGALISTR 121

  Fly    65 VIVTAAHC----LQSVSASVLQIRAGSSYWSSGGVTFSVSSFKNHEGYNANTMVNDIAIIKINGA 125
            :::|:|.|    |:.......:::|..|.      .:||::.       ....:.|:|::.::..
  Fly   122 LVLTSALCFPRTLRQPPPRSYKLQASRSR------IYSVANL-------ITGAIEDMALLLLHAP 173

  Fly   126 LTFSSTIKAIGLASSNPANGAAASVSGWGTLSYGSSSIPSQLQYVNVNIVSQSQCASSTYGYGSQ 190
            |. ...:..|.|..|........::       |.|.   ..|:::...::..|.|..| |.....
  Fly   174 LE-DPFVHPIDLCESPLRRNDNVTM-------YMSQ---QHLRFLRTKLIPNSNCKRS-YAQDEN 226

  Fly   191 --IRSTMICAAASGKDA-CQGDSGGPLVSGGVLVGVVSWGYGCAYSNYPG-VYADVAALRS 247
              |..||:||..|.:.. ||...|..|:....|.||..:|..|:.....| :||||...|:
  Fly   227 AFITQTMLCALNSNRLVDCQTAKGDVLLHQDRLCGVDIYGQHCSDGGVNGELYADVFKART 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30025NP_725036.1 Tryp_SPc 30..249 CDD:214473 51/231 (22%)
intrNP_651633.1 Tryp_SPc 112..284 CDD:473915 44/196 (22%)

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