Protein Alignment Hoxc4 and zen2

DIOPT Version :10

• Sequence 1: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Sequence 2: NP_476794.1
• Gene: zen2 / 40827
• FlyBaseID: FBgn0004054
• Length: 252
• Species: Drosophila melanogaster
• Alignment Length: 157
• Identity: 54/157 - (34%)
• Similarity: 73/157 - (46%)
• Gaps: 45/157 - (28%)

  Rat   134 IVYPWMK-KIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197
            ::||.:: .:..:......:..:.||||||::..|::|||:|||.|:||.|.|||||:..|.|:|
  Fly    20 MMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTE 84

  Rat   198 RQIKIWFQNRRMKWKKDH----------------------------------RLPNTKVRSAPPA 228
            ||:||||||||||.||..                                  |..||.|.:||
  Fly    85 RQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP-- 147

  Rat   229 GAAPSTLSAATPGTSEDHSQSATPPEQ 255
                  |.....|..|:  ...|||.|
  Fly   148 ------LRQVDHGVLEE--GQITPPYQ 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hoxc4	NP_001103354.1	Homeodomain	157..213	CDD:459649	37/55 (67%)
zen2	NP_476794.1	Homeodomain	44..100	CDD:459649	37/55 (67%)