DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh8 and CG31937

DIOPT Version :10

Sequence 1:NP_001025461.1 Gene:Rdh8 / 235033 MGIID:2685028 Length:317 Species:Mus musculus
Sequence 2:NP_608616.2 Gene:CG31937 / 326177 FlyBaseID:FBgn0031360 Length:321 Species:Drosophila melanogaster


Alignment Length:199 Identity:67/199 - (33%)
Similarity:103/199 - (51%) Gaps:18/199 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 RTVLISGCSSGIGLELALQLAHDPRQRYQVVATMRDLG-----KKEPLEAAAGEALGKTLSVVQL 65
            :.|.|:|.|||||..|||.||   |...::|.:.|.|.     ::|.|.||.|....|.:.|:|:
  Fly    47 QVVWITGASSGIGRALALSLA---RHGVKLVLSARRLEQLEQVQEECLAAARGLLATKDVLVIQM 108

Mouse    66 DVCN-DESVT---DCLSHIEGGQVDVLVNNAGVGLVGPLEGLSLATMQSVFNTNFFGAVRLVKAV 126
            |:.: ||..|   ..|:|..  ::||||||||.........:.:...:.:|..:.|..|.|.:.|
  Fly   109 DMLDLDEHKTHLNTVLNHFH--RLDVLVNNAGRSQRASWTEVEIEVDRELFELDVFAVVHLSRLV 171

Mouse   127 LPGMKRRR--QGHIVVVSSVMGLQGVMFNDVYAASKFALEGFFESLAIQLRQFNIFISMVEPGPV 189
            :.....:.  :|||...||:.|...|.|:..|.|:|.||..:..||.:::|:.:  :|:..|||:
  Fly   172 VRYFVEQNGGRGHIAATSSIAGFSPVPFSPTYCAAKHALNAYLLSLKVEMRKLD--VSLFAPGPI 234

Mouse   190 TTDF 193
            .|||
  Fly   235 ATDF 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh8NP_001025461.1 Rossmann-fold NAD(P)(+)-binding proteins 6..263 CDD:473865 67/199 (34%)
CG31937NP_608616.2 Rossmann-fold NAD(P)(+)-binding proteins 44..293 CDD:473865 67/199 (34%)

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