DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX3 and COX3

DIOPT Version :10

Sequence 1:YP_009047271.1 Gene:COX3 / 19893540 FlyBaseID:FBgn0013676 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_009328.1 Gene:COX3 / 854627 SGDID:S000007283 Length:269 Species:Saccharomyces cerevisiae


Alignment Length:267 Identity:116/267 - (43%)
Similarity:160/267 - (59%) Gaps:12/267 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STHSNHPFHLVDYSPWP-------LTGAIGAMTTVSGMVKWFHQYDISLFVLGNIITILTVYQWW 59
            |.|..||||:|..||||       |:.|:....|:.|.:...:...::||||     :.:...|:
Yeast     7 SRHQQHPFHMVMPSPWPIVVSFALLSLALSTALTMHGYIGNMNMVYLALFVL-----LTSSILWF 66

  Fly    60 RDVSREGTYQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIIS 124
            ||:..|.||.|.||.||..|:..|.::|:|||||.|...|||:|||::||.:.|||.|||:||.:
Yeast    67 RDIVAEATYLGDHTMAVRKGINLGFLMFVLSEVLIFAGLFWAYFHSAMSPDVTLGACWPPVGIEA 131

  Fly   125 FNPFQIPLLNTAILLASGVTVTWAHHSLMENNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTI 189
            ..|.::|||||.|||:||.|||::||:|:..|.::...||..|..|.:.|...|..||..|.|||
Yeast   132 VQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLITFWLIVIFVTCQYIEYTNAAFTI 196

  Fly   190 ADSIYGSTFFMATGFHGIHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLY 254
            :|.:|||.|:..||.|.:|:::....|.|...|..|.|.:..||.|:|....|.|.:||:|||||
Yeast   197 SDGVYGSVFYAGTGLHFLHMVMLAAMLGVNYWRMRNYHLTAGHHVGYETTIIYTHVLDVIWLFLY 261

  Fly   255 ITIYWWG 261
            :..||||
Yeast   262 VVFYWWG 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX3YP_009047271.1 COX3 4..258 CDD:214439 111/260 (43%)
COX3NP_009328.1 COX3 12..269 CDD:395410 114/262 (44%)

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