DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX3 and COX3

DIOPT Version :10

Sequence 1:YP_009047271.1 Gene:COX3 / 19893540 FlyBaseID:FBgn0013676 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_904334.1 Gene:COX3 / 17710 MGIID:102502 Length:261 Species:Mus musculus


Alignment Length:259 Identity:172/259 - (66%)
Similarity:203/259 - (78%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 THSNHPFHLVDYSPWPLTGAIGAMTTVSGMVKWFHQYDISLFVLGNIITILTVYQWWRDVSREGT 67
            ||..|.:|:|:.||||||||..|:...||:|.|||...|:|..||.:..|||:|||||||.||||
Mouse     2 THQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGT 66

  Fly    68 YQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPFQIPL 132
            |||.||..|..|||:||||||:|||.||..|||||:||||.|..:||..|||.||...||.::||
Mouse    67 YQGHHTPIVQKGLRYGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPL 131

  Fly   133 LNTAILLASGVTVTWAHHSLMENNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIADSIYGST 197
            |||::||||||::|||||||||...:...|.|..|::||:|||||||.||.|..|:|:|.|||||
Mouse   132 LNTSVLLASGVSITWAHHSLMEGKRNHMNQALLITIMLGLYFTILQASEYFETSFSISDGIYGST 196

  Fly   198 FFMATGFHGIHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIYWWG 261
            |||||||||:||:||:|||:|||||.|..||:..|||||||||||||||||||||||::|||||
Mouse   197 FFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAWYWHFVDVVWLFLYVSIYWWG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX3YP_009047271.1 COX3 4..258 CDD:214439 166/253 (66%)
COX3NP_904334.1 COX3 1..261 CDD:177161 172/259 (66%)

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