DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG45122 and Smkr1

Sequence 1:NP_001287309.1 Gene:CG45122 FlyBaseID:FBgn0266615 Length:86 Species:Drosophila melanogaster
Sequence 2:XP_017448565.1 Gene:Smkr1 RGDID:9298384 Length:154 Species:Rattus norvegicus

Alignment Length:86 Identity:33/87 (38%)
Similarity:47/87 (54%) Gaps:4/87 (5%)


  Fly     4 KSKKKRNSKDSTSSNAGSGEGEEKKKKEGGKKKGG---VGKSIGCDIFNDAAMENAYYVCHNVQD 65
            ::.::|:...:.::.||......|:||..|:.|.|   ..|....||.:.|||.|.||:.|||.|
  Rat    70 RTPRRRSIGGAATAGAGGNTRAGKRKKRKGRGKAGKKQKQKKPEVDILSPAAMLNLYYIAHNVAD 134

  Fly    66 VLKSRGFAWPDGQKKKKKGKR 86
            .|..|||.|| |..|.|:||:
  Rat   135 CLYLRGFPWP-GAPKGKRGKK 154



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0011076
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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