DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax6 and eyg

DIOPT Version :10

Sequence 1:NP_038655.1 Gene:Pax6 / 18508 MGIID:97490 Length:436 Species:Mus musculus
Sequence 2:NP_524042.2 Gene:eyg / 39419 FlyBaseID:FBgn0000625 Length:670 Species:Drosophila melanogaster


Alignment Length:480 Identity:154/480 - (32%)
Similarity:206/480 - (42%) Gaps:159/480 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse    25 TRQKIVELAH-SGARPCDISRILQTHADAKVQVLDNENVSNGCVSKILGRYYETGSIRPRA-IGG 87
            ::.:::|.:. .|.|..||::.:.|              ..|.|||:|      ||:||.. |||
  Fly   118 SQHRLLEFSRFGGLRGYDIAQHMLT--------------QQGAVSKLL------GSLRPPGLIGG 162

Mouse    88 SKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMG 152
            |||:||||.|||||.|||||.|:|||||||:||:|||||||...||||||||:|||.|:|     
  Fly   163 SKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAE----- 222

Mouse   153 ADGMYDKLRMLNGQTGSWGTRP---------GWYPGTSVPG-----------------QPTQDGC 191
                  ::.....:|.::|..|         .|:|..:|||                 .||....
  Fly   223 ------RVATEFARTAAYGLYPPPPHPYGSFTWHPAGNVPGGQGVPPPPPPSALWSVAAPTLANL 281

Mouse   192 QQQE---------------------GGGENTNSISSNG---------------------EDSDEA 214
            ....                     .||..||...|.|                     :|.||.
  Fly   282 PPSAASAVPVSTCGSLSSAHLMAGGAGGTPTNRAISPGSGSHDTLESADENRHIDSDYLDDDDEP 346

Mouse   215 QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKW 279
                    |.:||||:|:.||:|.|||||:::|||.|..||||:::..|.|||:|||||||||||
  Fly   347 --------KFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKW 403

Mouse   280 RREEKLRNQRRQASN------------------TPSHIPISSSFSTSV-YQPIPQPTTPVSSFTS 325
            ||.:::...:||.|:                  |||:   .||.|||. ..|:|.|..|:     
  Fly   404 RRHQRMNLLKRQRSSPANPLHSQQSNDAPASSPTPSN---HSSASTSAPVAPVPPPQQPL----- 460

Mouse   326 GSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSV-----------N 379
                     .|...:|...|.||..:.   |:..|.......:...|||.|:.           .
  Fly   461 ---------PLCGDHSPQGPPPSVLLH---PLHGPPGGHHHHHPLHLPTHPAALQLLSHYHQQQQ 513

Mouse   380 GRSYDTYTPPHMQTHMNSQPMGTSG 404
            .:....:.....|.|...|.:..||
  Fly   514 QQQQQQHQQQQQQHHQQQQQLSPSG 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pax6NP_038655.1 PAX 4..142 CDD:128645 60/118 (51%)
Homeodomain 226..281 CDD:459649 36/54 (67%)
eygNP_524042.2 HTH_ARSR 120..217 CDD:481197 60/116 (52%)
Homeodomain 349..405 CDD:459649 36/55 (65%)

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